RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 HSCBQ8IWL3 235 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 BRSK2Q8IWQ3 736 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 DCP1BQ8IZD4 617 aaKnown RBP7.22□□□□□ -1.25
SCAF11-211ENST00000547950 MAML2Q8IZL2 1156 aaPredicted RBP7.22□□□□□ -1.25
SCAF11-211ENST00000547950 C1orf127Q8N9H9 656 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 IQUBQ8NA54 791 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 CSGALNACT1Q8TDX6 532 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 FAM3CQ92520 227 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 SNX21Q969T3 373 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 PSMG2Q969U7 264 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 RSPRY1Q96DX4 576 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 OSBPL6Q9BZF3 934 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 TRPV4Q9HBA0 871 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 PDE11AQ9HCR9 933 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 ZNF334Q9HCZ1 680 aaPredicted RBP7.22□□□□□ -1.25
SCAF11-211ENST00000547950 R3HCC1Q9Y3T6 440 aaKnown RBP7.22□□□□□ -1.25
SCAF11-211ENST00000547950 PIAS3Q9Y6X2 628 aa7.22□□□□□ -1.25
SCAF11-211ENST00000547950 MORC2Q9Y6X9 1032 aaPredicted RBP7.22□□□□□ -1.25
SCAF11-211ENST00000547950 ZNF233A6NK53 670 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 SHISA7A6NL88 538 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 SLC38A8A6NNN8 435 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 HUS1O60921 280 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 PRPF40AO75400 957 aaKnown RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 YEATS4O95619 227 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 FGF19O95750 216 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 LMNAP02545 664 aaKnown RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 ZSCAN22P10073 491 aaPredicted RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 HAPLN1P10915 354 aaPredicted RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 CCNE1P24864 410 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 CASP1P29466 404 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 PNPLA4P41247 253 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 ME1P48163 572 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 KPNA1P52294 538 aaPredicted RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 ASIC1P78348 528 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 CYP4F8P98187 520 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 PKDCCQ504Y2 493 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 ARHGAP15Q53QZ3 475 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 PLA2G2CQ5R387 149 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 SDHAF4Q5VUM1 108 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 LMBRD2Q68DH5 695 aaPredicted RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 ZC3H14Q6PJT7 736 aaKnown RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 TSSK4Q6SA08 328 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 CBWD2Q8IUF1 395 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 NELFCDQ8IXH7 590 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 GPD1LQ8N335 351 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 PDCL2Q8N4E4 241 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 SPPL2BQ8TCT7 592 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 C2orf15Q8WU43 125 aaKnown RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 DEPDC1BQ8WUY9 529 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 DNASE1L2Q92874 299 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 E2F7Q96AV8 911 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 CLDN23Q96B33 292 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 ZFYVE19Q96K21 471 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 ZNF560Q96MR9 790 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 LRRC3BQ96PB8 259 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 GCNAQ96QF7 691 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 HINFPQ9BQA5 517 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 PI4K2AQ9BTU6 479 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 SLC46A2Q9BY10 475 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 TRIM9Q9C026 710 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 MTMR12Q9C0I1 747 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 SMG9Q9H0W8 520 aaKnown RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 BLZF1Q9H2G9 400 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 TNMDQ9H2S6 317 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 SEMA4AQ9H3S1 761 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 CUEDC2Q9H467 287 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 TASP1Q9H6P5 420 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 LMAN1LQ9HAT1 526 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 TMLHEQ9NVH6 421 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 KBTBD4Q9NVX7 518 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 DDX43Q9NXZ2 648 aaKnown RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 HSFX1Q9UBD0 423 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 GTF3C4Q9UKN8 822 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 MAGED2Q9UNF1 606 aaPredicted RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 PCDHB5Q9Y5E4 795 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 SNX9Q9Y5X1 595 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 MYO10Q9HD67 2058 aa7.21□□□□□ -1.26
SCAF11-211ENST00000547950 TDRD15B5MCY1 1934 aaKnown RBP7.21□□□□□ -1.26
SCAF11-211ENST00000547950 CLIC2O15247 247 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 HCRTO43612 131 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 F13A1P00488 732 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 TNNC2P02585 160 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 PDGFRBP09619 1106 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 TMEM191BP0C7N4 346 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 ATF6P18850 670 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 CYP2F1P24903 491 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 HOXD13P35453 343 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 AFMP43652 599 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 SOX9P48436 509 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 GPR15P49685 360 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 MYL7Q01449 175 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 TSPY1Q01534 308 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 SMARCB1Q12824 385 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 MYO1EQ12965 1108 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 MTAPQ13126 283 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 FZD5Q13467 585 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 PKP1Q13835 747 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 NFE2Q16621 373 aaPredicted RBP7.2□□□□□ -1.26
SCAF11-211ENST00000547950 DDR2Q16832 855 aa7.2□□□□□ -1.26
SCAF11-211ENST00000547950 DUOXA2Q1HG44 320 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms