RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 APPBP2Q92624 585 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 RGMAQ96B86 450 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 CYFIP2Q96F07 1278 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 PADI4Q9UM07 663 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 SIK3Q9Y2K2 1263 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 PCDHB1Q9Y5F3 818 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 BCL9O00512 1426 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 PRAMEF33A0A0G2JMD5 474 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 H3BNC9 293 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 PRAMEF10O60809 474 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 CDC45O75419 566 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 MTHFD2P13995 350 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 CANXP27824 592 aaKnown RBP3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 SREBF1P36956 1147 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 NXPH1P58417 271 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 IL2P60568 153 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 RPS7P62081 194 aaKnown RBP3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 TCEA2Q15560 299 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 FSCN1Q16658 493 aaKnown RBP3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 C21orf62-AS1Q17RA5 79 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 KIAA0907Q7Z7F0 614 aaPredicted RBP3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 AMIGO2Q86SJ2 522 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 PQLC1Q8N2U9 271 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 NLGN4YQ8NFZ3 816 aaPredicted RBP3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 SLC5A5Q92911 643 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 FATE1Q969F0 183 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 FAM122AQ96E09 287 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 HMCESQ96FZ2 354 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 GPR101Q96P66 508 aaPredicted RBP3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 HAPLN3Q96S86 360 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 RBM12Q9NTZ6 932 aaKnown RBP3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 WWOXQ9NZC7 414 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 ZNF580Q9UK33 172 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 PPLO60437 1756 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 ANKRD50Q9ULJ7 1429 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 PKD1L3Q7Z443 1732 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 CACNA1AO00555 2505 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 PLEKHH1Q9ULM0 1364 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 PIK3C2AO00443 1686 aa3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 TNRC6CQ9HCJ0 1690 aaKnown RBP3.24□□□□□ -1.89
DEPDC4-204ENST00000547823 VIRMAQ69YN4 1812 aaKnown RBP3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 ENPP3O14638 875 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 URI1O94763 535 aaPredicted RBP3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 SNHG28P0DPA3 235 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 HSPA8P11142 646 aaKnown RBP3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 EPHB2P29323 1055 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 ADSLP30566 484 aaPredicted RBP3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 ALDH1A3P47895 512 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 ITIH3Q06033 890 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 KLF9Q13886 244 aaPredicted RBP3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 ETFDHQ16134 617 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 ANO4Q32M45 955 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 MUM1L1Q5H9M0 696 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 BROXQ5VW32 411 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 C10orf71Q711Q0 1435 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 NOP9Q86U38 636 aaKnown RBP3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 LRRTM3Q86VH5 581 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 TFAP2BQ92481 460 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 NINJ1Q92982 152 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 MARS2Q96GW9 593 aaKnown RBP3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 FEZ1Q99689 392 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 GREM2Q9H772 168 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 ANLNQ9NQW6 1124 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 SPTLC3Q9NUV7 552 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 STK26Q9P289 416 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 ZBTB21Q9ULJ3 1066 aa3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 BRD4O60885 1362 aaPredicted RBP3.23□□□□□ -1.89
DEPDC4-204ENST00000547823 TRPM1Q7Z4N2 1603 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 PXDNLA1KZ92 1463 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 CRB1P82279 1406 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 ANKARQ7Z5J8 1434 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 LINC00473A8K010 186 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 PPEF2O14830 753 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 FKBP9O95302 570 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 NTN1O95631 604 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 LATS1O95835 1130 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 TTLL1O95922 423 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 LPLP06858 475 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 KCNA2P16389 499 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 ENPP1P22413 925 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 SLC6A2P23975 617 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 MRPS9P82933 396 aaKnown RBP3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 DALRD3Q5D0E6 543 aaKnown RBP3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 RUSC1-AS1Q66K80 236 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 Q6ZVL8 140 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 FKBP9P1Q75LS8 142 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 TECPR1Q7Z6L1 1165 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 KRT73Q86Y46 540 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 DHX37Q8IY37 1157 aaKnown RBP3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 TOR1AIP2Q8NFQ8 470 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 AUTS2Q8WXX7 1259 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 TMEM79Q9BSE2 394 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 FBXO34Q9NWN3 711 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 HSFX1Q9UBD0 423 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 GPRASP1Q5JY77 1395 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 ABCC11Q96J66 1382 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 SBF1O95248 1867 aa3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 COL5A2P05997 1499 aaPredicted RBP3.22□□□□□ -1.89
DEPDC4-204ENST00000547823 IGSF1Q8N6C5 1336 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms