RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ZFP37Q9Y6Q3 630 aaPredicted RBP20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 GOLGA6L22H0YM25 854 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 STX10O60499 249 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 ATF6P18850 670 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 CCR2P41597 374 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 EPHA5P54756 1037 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 CDH8P55286 799 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 DCAF17Q5H9S7 520 aaPredicted RBP20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 CYP4A22Q5TCH4 519 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 TCERG1LQ5VWI1 586 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 SCARA5Q6ZMJ2 495 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 PDZD4Q76G19 769 aaPredicted RBP20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 FILIP1Q7Z7B0 1213 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 GPT2Q8TD30 523 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 ING5Q8WYH8 240 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 EDAQ92838 391 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 TCEAL4Q96EI5 215 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 LPIN3Q9BQK8 851 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 LRRC3Q9BY71 257 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 KCNK12Q9HB15 430 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 ASAH2Q9NR71 780 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 ARMCX3Q9UH62 379 aaPredicted RBP20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 SORCS3Q9UPU3 1222 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 ASB3Q9Y575 518 aa20.02■□□□□ 0.8
PRPF40B-206ENST00000547764 NRG2O14511 850 aaPredicted RBP20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 ZNF197O14709 1029 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 LRRN2O75325 713 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 MYL4P12829 197 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 P4HA1P13674 534 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 CYP2F1P24903 491 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 RAP1GAPP47736 663 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 MXI1P50539 228 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 ZXDAP98168 799 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 DNAJB7Q7Z6W7 309 aaPredicted RBP20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 SPATA2LQ8IUW3 424 aaPredicted RBP20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 NPAS3Q8IXF0 933 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 LEMD2Q8NC56 503 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 FAM200AQ8TCP9 573 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 RSAD2Q8WXG1 361 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 PSMG2Q969U7 264 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 C1QTNF1Q9BXJ1 281 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 SDCBP2Q9H190 292 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 METTL14Q9HCE5 456 aaKnown RBP20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 ABCB6Q9NP58 842 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 IGSF9Q9P2J2 1179 aa20.01■□□□□ 0.79
PRPF40B-206ENST00000547764 A8MXQ7 604 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 MOSPD3O75425 235 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 MICAL2O94851 1124 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 CEBPBP17676 345 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 GPR15P49685 360 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 NOP14P78316 857 aaKnown RBP20■□□□□ 0.79
PRPF40B-206ENST00000547764 VEPH1Q14D04 833 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 MAPRE1Q15691 268 aaKnown RBP20■□□□□ 0.79
PRPF40B-206ENST00000547764 CFAP221Q4G0U5 840 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 POTEHQ6S545 545 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 FRMD5Q7Z6J6 570 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 ITIH5Q86UX2 942 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 TMC8Q8IU68 726 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 ST13P5Q8NFI4 369 aaPredicted RBP20■□□□□ 0.79
PRPF40B-206ENST00000547764 GPR152Q8TDT2 470 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 GIPC2Q8TF65 315 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 SEMA4DQ92854 862 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 SLC35C1Q96A29 364 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 MYLPFQ96A32 169 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 FUBP3Q96I24 572 aaKnown RBP eCLIP20■□□□□ 0.79
PRPF40B-206ENST00000547764 IMPG2Q9BZV3 1241 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 SMOC2Q9H3U7 446 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 DPEP3Q9H4B8 488 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 APOBEC3GQ9HC16 384 aaKnown RBP20■□□□□ 0.79
PRPF40B-206ENST00000547764 C11orf16Q9NQ32 467 aa20■□□□□ 0.79
PRPF40B-206ENST00000547764 TRIOO75962 3097 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 FAM86C2PA6NEL3 165 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 ANHXE9PGG2 379 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 GJA1P17302 382 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 PTPN1P18031 435 aaKnown RBP19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 ASPAP45381 313 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 MTMR3Q13615 1198 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 CCDC40Q4G0X9 1142 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 CBWD6Q4V339 395 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 MDH1BQ5I0G3 518 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 CBWD3Q5JTY5 395 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 CBWD5Q5RIA9 395 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 C4orf50Q6ZRC1 276 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 MLKLQ8NB16 471 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 FBXL13Q8NEE6 735 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 MYCBPAPQ8TBZ2 947 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 MCRS1Q96EZ8 462 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 SRRTQ9BXP5 876 aaKnown RBP19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 ZNF334Q9HCZ1 680 aaPredicted RBP19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 GDE1Q9NZC3 331 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 MAGEC2Q9UBF1 373 aaPredicted RBP19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 RWDD2AQ9UIY3 292 aa19.99■□□□□ 0.79
PRPF40B-206ENST00000547764 CYP27A1Q02318 531 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 TDGQ13569 410 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 HTR4Q13639 388 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 DDR2Q16832 855 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 SDHAF4Q5VUM1 108 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 PARM1Q6UWI2 310 aa19.98■□□□□ 0.79
PRPF40B-206ENST00000547764 CCDC150Q8NCX0 1101 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms