RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 LRWD1Q9UFC0 647 aa14.61□□□□□ -0.07
CCDC59-202ENST00000547758 LHX6Q9UPM6 363 aa14.61□□□□□ -0.07
CCDC59-202ENST00000547758 SMG1Q96Q15 3661 aaKnown RBP14.61□□□□□ -0.07
CCDC59-202ENST00000547758 FREM2Q5SZK8 3169 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 E9PMD0 336 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 CDX4O14627 284 aaPredicted RBP14.6□□□□□ -0.07
CCDC59-202ENST00000547758 PPEF2O14830 753 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 CLDN3O15551 220 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 XPOTO43592 962 aaKnown RBP14.6□□□□□ -0.07
CCDC59-202ENST00000547758 JAK2O60674 1132 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 CLTAP09496 248 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 ARSAP15289 507 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 U2AF2P26368 475 aaKnown RBP eCLIP14.6□□□□□ -0.07
CCDC59-202ENST00000547758 MATR3P43243 847 aaKnown RBP eCLIP14.6□□□□□ -0.07
CCDC59-202ENST00000547758 DGKEP52429 567 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 PPP2R3AQ06190 1150 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 TAF12Q16514 161 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 SLC39A12Q504Y0 691 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 NAIF1Q69YI7 327 aaPredicted RBP14.6□□□□□ -0.07
CCDC59-202ENST00000547758 ZPBP2Q6X784 338 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 C11orf74Q86VG3 221 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 MAB21L3Q8N8X9 362 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 SNX29Q8TEQ0 813 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 USP13Q92995 863 aaPredicted RBP14.6□□□□□ -0.07
CCDC59-202ENST00000547758 SENP8Q96LD8 212 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 KIF9Q9HAQ2 790 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 TBX20Q9UMR3 447 aa14.6□□□□□ -0.07
CCDC59-202ENST00000547758 PATE3B3GLJ2 98 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 NUDT7P0C024 238 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 DDX6P26196 483 aaKnown RBP eCLIP14.59□□□□□ -0.07
CCDC59-202ENST00000547758 GJA4P35212 333 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 CDR1P51861 262 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 LILRA4P59901 499 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 PDGFRLQ15198 375 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 SAFBQ15424 915 aaKnown RBP eCLIP14.59□□□□□ -0.07
CCDC59-202ENST00000547758 ME3Q16798 604 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 RINT1Q6NUQ1 792 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 KIAA1211LQ6NV74 962 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 CC2D1AQ6P1N0 951 aaPredicted RBP14.59□□□□□ -0.07
CCDC59-202ENST00000547758 CYP2U1Q7Z449 544 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 TMEM150AQ86TG1 271 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 DEFB124Q8NES8 71 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 RIN3Q8TB24 985 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 GIPC2Q8TF65 315 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 NTPCRQ9BSD7 190 aaKnown RBP14.59□□□□□ -0.07
CCDC59-202ENST00000547758 HAPLN2Q9GZV7 340 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 TDP1Q9NUW8 608 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 DNM3Q9UQ16 869 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 INVSQ9Y283 1065 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 NEUROG3Q9Y4Z2 214 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 ITPR1Q14643 2758 aa14.59□□□□□ -0.07
CCDC59-202ENST00000547758 MYO18AQ92614 2054 aaKnown RBP14.58□□□□□ -0.08
CCDC59-202ENST00000547758 LOC400499M0QZD8 3231 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 SFI1A8K8P3 1242 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 LACTBL1A8MY62 500 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 MAPTP10636 758 aaKnown RBP14.58□□□□□ -0.08
CCDC59-202ENST00000547758 NMT1P30419 496 aaKnown RBP14.58□□□□□ -0.08
CCDC59-202ENST00000547758 TNFSF9P41273 254 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 NLRP12P59046 1061 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 GUCY1B3Q02153 619 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 PSMD2Q13200 908 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 UAP1L1Q3KQV9 507 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 USP39Q53GS9 565 aaKnown RBP14.58□□□□□ -0.08
CCDC59-202ENST00000547758 TTC38Q5R3I4 469 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 C1orf186Q6ZWK4 172 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 CPA6Q8N4T0 437 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 TMEM161BQ8NDZ6 487 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 TSTD1Q8NFU3 115 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 SPIRE2Q8WWL2 714 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 EZH1Q92800 747 aaPredicted RBP14.58□□□□□ -0.08
CCDC59-202ENST00000547758 CD101Q93033 1021 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 TPSD1Q9BZJ3 242 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 ZCWPW1Q9H0M4 648 aa14.58□□□□□ -0.08
CCDC59-202ENST00000547758 HYAL3O43820 417 aaPredicted RBP14.57□□□□□ -0.08
CCDC59-202ENST00000547758 F11P03951 625 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 CYP11A1P05108 521 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 SMTNP53814 917 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 IRX4P78413 519 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 PDIA5Q14554 519 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 ZNF268Q14587 947 aaPredicted RBP14.57□□□□□ -0.08
CCDC59-202ENST00000547758 SPATA1Q5VX52 437 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 TXNDC8Q6A555 127 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 C4orf32Q8N8J7 132 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 IGSF22Q8N9C0 903 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 SPPL2BQ8TCT7 592 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 TMC2Q8TDI7 906 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 C2orf15Q8WU43 125 aaKnown RBP14.57□□□□□ -0.08
CCDC59-202ENST00000547758 TSPAN18Q96SJ8 248 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 TIPINQ9BVW5 301 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 RAB34Q9BZG1 259 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 ECT2Q9H8V3 914 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 KCNG1Q9UIX4 513 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 MSRB2Q9Y3D2 182 aa14.57□□□□□ -0.08
CCDC59-202ENST00000547758 MYOFQ9NZM1 2061 aa14.56□□□□□ -0.08
CCDC59-202ENST00000547758 PPP1R37O75864 691 aa14.56□□□□□ -0.08
CCDC59-202ENST00000547758 HAPLN1P10915 354 aaPredicted RBP14.56□□□□□ -0.08
CCDC59-202ENST00000547758 PLS3P13797 630 aa14.56□□□□□ -0.08
CCDC59-202ENST00000547758 HMGA1P17096 107 aaKnown RBP14.56□□□□□ -0.08
CCDC59-202ENST00000547758 BCKDHBP21953 392 aa14.56□□□□□ -0.08
CCDC59-202ENST00000547758 PAX3P23760 479 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms