RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	FNBP1L	Q5T0N5	605 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	ZCCHC23	Q6ZST2	131 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	MCPH1	Q8NEM0	835 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	CCHCR1	Q8TD31	782 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	ZNF526	Q8TF50	670 aa	Predicted RBP	13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	FAF2	Q96CS3	445 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	CCDC124	Q96CT7	223 aa	Known RBP	13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	TRIM55	Q9BYV6	548 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	COL16A1	Q07092	1604 aa	Predicted RBP	13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	NCKAP1L	P55160	1127 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	NFIL3	Q16649	462 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	RHBDF2	Q6PJF5	856 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	RNF149	Q8NC42	400 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	JOSD2	Q8TAC2	188 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	SPATA18	Q8TC71	538 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	TRAPPC12	Q8WVT3	735 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	ATXN7L3B	Q96GX2	97 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	SLITRK1	Q96PX8	696 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	TSSK1B	Q9BXA7	367 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	NR2E3	Q9Y5X4	410 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	ADAMTSL1	Q8N6G6	1762 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	APRT	P07741	180 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	GLRA2	P23416	452 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	ALDH18A1	P54886	795 aa	Known RBP	13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	CENPC	Q03188	943 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	CRYM	Q14894	314 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	TSNAXIP1	Q2TAA8	658 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	ZNF699	Q32M78	642 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	TMEM63B	Q5T3F8	832 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	RCOR2	Q8IZ40	523 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	ZCCHC9	Q8N567	271 aa	Known RBP	13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	PPP1R13L	Q8WUF5	828 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	PPP1R36	Q96LQ0	422 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	DDX50	Q9BQ39	737 aa	Known RBP	13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	RAB6B	Q9NRW1	208 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374	CISH	Q9NSE2	258 aa		13.64	□□□□□ -0.23
BRF1-210	ENST00000547374		H3BRJ5	948 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	WNT10B	O00744	389 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	TOM1L1	O75674	476 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	RNF8	O76064	485 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	HADHB	P55084	474 aa	Known RBP	13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	CDH6	P55285	790 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	GCNT1	Q02742	428 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	PTK7	Q13308	1070 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	OR6B2	Q6IFH4	312 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	UNC45B	Q8IWX7	931 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	EXD1	Q8NHP7	514 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	WRNIP1	Q96S55	665 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	MANSC1	Q9H8J5	431 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	PICK1	Q9NRD5	415 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	KRT36	O76013	467 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	UBTFL6	P0CB48	400 aa	Predicted RBP	13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	SFN	P31947	248 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	FSTL1	Q12841	308 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	MYBPC2	Q14324	1141 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	KRT81	Q14533	505 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	ZACN	Q401N2	412 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	DSTYK	Q6XUX3	929 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	MON1B	Q7L1V2	547 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	ARMC2	Q8NEN0	867 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	ACAP3	Q96P50	834 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	STRA6	Q9BX79	667 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	ZNF302	Q9NR11	478 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	ARHGEF3	Q9NR81	526 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	FAM237B	A0A1B0GVD1	139 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	VNN1	O95497	513 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	ZCCHC18	P0CG32	403 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	ELK3	P41970	407 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	GEMIN4	P57678	1058 aa	Known RBP	13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	NR1H3	Q13133	447 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	KPNB1	Q14974	876 aa	Known RBP	13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	THEMIS2	Q5TEJ8	643 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	MROH9	Q5TGP6	573 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	TMEM154	Q6P9G4	183 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	EFCAB3	Q8N7B9	438 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	TMC2	Q8TDI7	906 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	HEXIM2	Q96MH2	286 aa	Known RBP	13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	TMEM109	Q9BVC6	243 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	CYP4F11	Q9HBI6	524 aa		13.63	□□□□□ -0.23
BRF1-210	ENST00000547374	TXNDC9	O14530	226 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	CAPN9	O14815	690 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	MCF2L	O15068	1137 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	MYL2	P10916	166 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	EPHB1	P54762	984 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	FAAP100	Q0VG06	881 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	HADH	Q16836	314 aa	Known RBP	13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	TFDP3	Q5H9I0	405 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	DLK2	Q6UY11	383 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	C7orf31	Q8N865	590 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	NSUN6	Q8TEA1	469 aa	Known RBP	13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	UTP4	Q969X6	686 aa	Known RBP	13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	CLPTM1L	Q96KA5	538 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	MFSD14A	Q96MC6	490 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	ARL8B	Q9NVJ2	186 aa		13.62	□□□□□ -0.23
BRF1-210	ENST00000547374	ASMTL	O95671	621 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms