RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RPS6KA5O75582 802 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 IL18RAPO95256 599 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 YY1P25490 414 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 IL1R2P27930 398 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 RWDD2BP57060 319 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 RBP5P82980 135 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 PTGISQ16647 500 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 FAM187BQ17R55 369 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 SEL1L2Q5TEA6 688 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 SCYL2Q6P3W7 929 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 GLIS1Q8NBF1 620 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 TMEM35BQ8NCS4 154 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 SOCS4Q8WXH5 440 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 CFAP57Q96MR6 1250 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 NFKBIZQ9BYH8 718 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 ADAM33Q9BZ11 813 aa12.66□□□□□ -0.38
CCDC38-202ENST00000546386 USP34Q70CQ2 3546 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 AGPSO00116 658 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 MGEA5O60502 916 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 DUSP11O75319 330 aaKnown RBP12.65□□□□□ -0.38
CCDC38-202ENST00000546386 PIAS1O75925 651 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 KRT3P12035 628 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 LCP1P13796 627 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 ANXA13P27216 316 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 TM4SF4P48230 202 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 GOLGA7BQ2TAP0 167 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 FAM102AQ5T9C2 384 aaPredicted RBP12.65□□□□□ -0.38
CCDC38-202ENST00000546386 LIN9Q5TKA1 542 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 OR6B2Q6IFH4 312 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 ARFGAP1Q8N6T3 406 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 FEZF2Q8TBJ5 459 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 AENQ8WTP8 325 aaKnown RBP12.65□□□□□ -0.38
CCDC38-202ENST00000546386 SNX27Q96L92 541 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 TTC7AQ9ULT0 858 aaPredicted RBP12.65□□□□□ -0.38
CCDC38-202ENST00000546386 ATP8A1Q9Y2Q0 1164 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 PCDHA3Q9Y5H8 950 aa12.65□□□□□ -0.38
CCDC38-202ENST00000546386 LRRD1A4D1F6 860 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 FOXO6A8MYZ6 492 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 HAS3O00219 553 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 PSMA2P25787 234 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 ECHS1P30084 290 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 CTNNA1P35221 906 aaKnown RBP12.65□□□□□ -0.39
CCDC38-202ENST00000546386 GRM5P41594 1212 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 SCNN1GP51170 649 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 SF3A3Q12874 501 aaKnown RBP eCLIP12.65□□□□□ -0.39
CCDC38-202ENST00000546386 ZNF410Q86VK4 478 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 SLC13A5Q86YT5 568 aaPredicted RBP12.65□□□□□ -0.39
CCDC38-202ENST00000546386 IFT20Q8IY31 132 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 C3orf58Q8NDZ4 430 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 CARD9Q9H257 536 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 ASB7Q9H672 318 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 TMPRSS4Q9NRS4 437 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 PARVAQ9NVD7 372 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 BCCIPQ9P287 314 aaKnown RBP eCLIP12.65□□□□□ -0.39
CCDC38-202ENST00000546386 UVRAGQ9P2Y5 699 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 NR2E3Q9Y5X4 410 aa12.65□□□□□ -0.39
CCDC38-202ENST00000546386 TTC3P53804 2025 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 CEP290O15078 2479 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 BEST1O76090 585 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 CLCNKBP51801 687 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 PLCB3Q01970 1234 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 IFRD2Q12894 506 aaPredicted RBP12.64□□□□□ -0.39
CCDC38-202ENST00000546386 MMRN1Q13201 1228 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 SGO2Q562F6 1265 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 C9orf57Q5W0N0 161 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 TRNP1Q6NT89 227 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 C11orf63Q6NUN7 778 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 MFSD7Q6UXD7 560 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 TTC30AQ86WT1 665 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 FMNL3Q8IVF7 1028 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 RASGEF1CQ8N431 466 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 SMC1BQ8NDV3 1235 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 FBXO25Q8TCJ0 367 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 RAET1EQ8TD07 263 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 UBLCP1Q8WVY7 318 aaPredicted RBP12.64□□□□□ -0.39
CCDC38-202ENST00000546386 ARL8AQ96BM9 186 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 BCO2Q9BYV7 579 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 LOC102724159A0A0B4J2E5 919 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 TARSL2A2RTX5 802 aaKnown RBP12.64□□□□□ -0.39
CCDC38-202ENST00000546386 F5H423 210 aaPredicted RBP12.64□□□□□ -0.39
CCDC38-202ENST00000546386 PTGESO14684 152 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 PROSCO94903 275 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 SYF2O95926 243 aaKnown RBP12.64□□□□□ -0.39
CCDC38-202ENST00000546386 INHBEP58166 350 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 PWP2Q15269 919 aaKnown RBP12.64□□□□□ -0.39
CCDC38-202ENST00000546386 ODF2Q5BJF6 829 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 CAPN12Q6ZSI9 719 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 JAMLQ86YT9 394 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 HNRNPLLQ8WVV9 542 aaKnown RBP12.64□□□□□ -0.39
CCDC38-202ENST00000546386 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
CCDC38-202ENST00000546386 GTF2IRD1Q9UHL9 959 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 COL1A2P08123 1366 aa12.64□□□□□ -0.39
CCDC38-202ENST00000546386 SIP14410 1827 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 GOLGA6BA6NDN3 693 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 SEPT4O43236 478 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 GABBR2O75899 941 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 GPD2P43304 727 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 NDUFV1P49821 464 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 BCAR1P56945 870 aa12.63□□□□□ -0.39
CCDC38-202ENST00000546386 MCCD1P59942 119 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms