RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 NPM3O75607 178 aaKnown RBP15.41■□□□□ 0.06
HOXC11-202ENST00000546378 HLA-DRAP01903 254 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 GSTA1P08263 222 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 GTF2H1P32780 548 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 QARSP47897 775 aaKnown RBP15.41■□□□□ 0.06
HOXC11-202ENST00000546378 ATP5OP48047 213 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 NLRP11P59045 1033 aaKnown RBP15.41■□□□□ 0.06
HOXC11-202ENST00000546378 PSMC5P62195 406 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 NR1H3Q13133 447 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 PSMD6Q15008 389 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 Q3C1V9 767 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 MSS51Q4VC12 460 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 MROH9Q5TGP6 573 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 C9orf131Q5VYM1 1079 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 OLIG1Q8TAK6 271 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 GRK7Q8WTQ7 553 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 CENPTQ96BT3 561 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 MOCOSQ96EN8 888 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 FIZ1Q96SL8 496 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 TARS2Q9BW92 718 aaKnown RBP15.41■□□□□ 0.06
HOXC11-202ENST00000546378 VPS33BQ9H267 617 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 SLC17A6Q9P2U8 582 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 GGA2Q9UJY4 613 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 MROH7Q68CQ1 1323 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 PLIN4Q96Q06 1357 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 SMNDC1O75940 238 aaKnown RBP eCLIP15.41■□□□□ 0.06
HOXC11-202ENST00000546378 SORBS2O94875 1100 aaKnown RBP15.41■□□□□ 0.06
HOXC11-202ENST00000546378 HSPA6P17066 643 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 NOVP48745 357 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 CRADDP78560 199 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 HIF1AQ16665 826 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 C1orf220Q5T0J3 134 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 TMEM63BQ5T3F8 832 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 ARHGEF16Q5VV41 709 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 C1orf146Q5VVC0 180 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 DNAJC24Q6P3W2 148 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 RGS9BPQ6ZS82 235 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 FAM43BQ6ZT52 329 aaPredicted RBP15.41■□□□□ 0.06
HOXC11-202ENST00000546378 PHF12Q96QT6 1004 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 POLR3CQ9BUI4 534 aaPredicted RBP15.41■□□□□ 0.06
HOXC11-202ENST00000546378 APOL6Q9BWW8 343 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 TSSK1BQ9BXA7 367 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 INHBAP08476 426 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 TPBGLP0DKB5 382 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 CYP3A7P24462 503 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 RPS12P25398 132 aaKnown RBP15.4■□□□□ 0.06
HOXC11-202ENST00000546378 ORC2Q13416 577 aaPredicted RBP15.4■□□□□ 0.06
HOXC11-202ENST00000546378 ZBTB46Q86UZ6 589 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 PHC3Q8NDX5 983 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 CHURC1Q8WUH1 139 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 RMDN3Q96TC7 470 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 PAFAH2Q99487 392 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 TMEM120AQ9BXJ8 343 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 GPRC5DQ9NZD1 345 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 INPP5FQ9Y2H2 1132 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 FDX1P10109 184 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 HMGCS2P54868 508 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 USP4Q13107 963 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 C16orf46Q6P387 395 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 RHOT1Q8IXI2 618 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 PIP4K2CQ8TBX8 421 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 CLEC11AQ9Y240 323 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 ATRNL1Q5VV63 1379 aa15.4■□□□□ 0.06
HOXC11-202ENST00000546378 TRPA1O75762 1119 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 MMRN1Q13201 1228 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 Q4G0T1 1027 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 EMC10Q5UCC4 262 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 FAM71AQ8IYT1 594 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 ACTL9Q8TC94 416 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 CCHCR1Q8TD31 782 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 SLC26A7Q8TE54 656 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 PCMTD2Q9NV79 361 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 SCOCQ9UIL1 159 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 DIS3Q9Y2L1 958 aaKnown RBP15.39■□□□□ 0.05
HOXC11-202ENST00000546378 FIS1Q9Y3D6 152 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 YBX3P16989 372 aaKnown RBP eCLIP15.39■□□□□ 0.05
HOXC11-202ENST00000546378 NCF2P19878 526 aaPredicted RBP15.39■□□□□ 0.05
HOXC11-202ENST00000546378 SMARCA1P28370 1054 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 CDH8P55286 799 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 PPP1R15BQ5SWA1 713 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 FNBP1LQ5T0N5 605 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 RINLQ6ZS11 566 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 CENPUQ71F23 418 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 NLRX1Q86UT6 975 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 C3orf20Q8ND61 904 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 MIPEPQ99797 713 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 TRIM55Q9BYV6 548 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 TMEM206Q9H813 350 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 CYP39A1Q9NYL5 469 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 ADM5C9JUS6 153 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 TP73O15350 636 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 DGKIO75912 1065 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 PSMA2P25787 234 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 OTUD4Q01804 1114 aaKnown RBP15.39■□□□□ 0.05
HOXC11-202ENST00000546378 ACSBG2Q5FVE4 666 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 TRABD2AQ86V40 505 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 TBX20Q9UMR3 447 aa15.39■□□□□ 0.05
HOXC11-202ENST00000546378 EIF3DO15371 548 aaKnown RBP eCLIP15.38■□□□□ 0.05
HOXC11-202ENST00000546378 CFLARO15519 480 aa15.38■□□□□ 0.05
HOXC11-202ENST00000546378 UGT1A9O60656 530 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms