RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 RIN3Q8TB24 985 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 SEPT1Q8WYJ6 367 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 DDX1Q92499 740 aaKnown RBP7.45□□□□□ -1.22
CCDC60-205ENST00000546345 SPATA32Q96LK8 384 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 HEXIM2Q96MH2 286 aaKnown RBP7.45□□□□□ -1.22
CCDC60-205ENST00000546345 DNAJB4Q9UDY4 337 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 TPX2Q9ULW0 747 aaKnown RBP7.45□□□□□ -1.22
CCDC60-205ENST00000546345 ZKSCAN5Q9Y2L8 839 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 UNC79Q9P2D8 2635 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 THADAQ6YHU6 1953 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 CCDC195A0A1B0GUA6 201 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 SLC22A31A6NKX4 558 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 KCNK5O95279 499 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 C22orf31O95567 290 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 IGHDP01880 384 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 VTNP04004 478 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 HOXC13P31276 330 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 CD97P48960 835 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 SLC11A1P49279 550 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 PRKCQQ04759 706 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 LRP8Q14114 963 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 GIT2Q14161 759 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 SF3A2Q15428 464 aaKnown RBP7.44□□□□□ -1.22
CCDC60-205ENST00000546345 SYCP1Q15431 976 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 BMP2KLQ5H9B9 411 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 PRR23BQ6ZRT6 265 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 FAM43BQ6ZT52 329 aaPredicted RBP7.44□□□□□ -1.22
CCDC60-205ENST00000546345 CDH24Q86UP0 819 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 HOMER1Q86YM7 354 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 ABI1Q8IZP0 508 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 NME8Q8N427 588 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 ZCCHC14Q8WYQ9 949 aaKnown RBP7.44□□□□□ -1.22
CCDC60-205ENST00000546345 SMG7Q92540 1137 aaKnown RBP7.44□□□□□ -1.22
CCDC60-205ENST00000546345 STAMQ92783 540 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 SYAP1Q96A49 352 aaPredicted RBP7.44□□□□□ -1.22
CCDC60-205ENST00000546345 GPRASP2Q96D09 838 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 SHDQ96IW2 340 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 BBC3Q96PG8 261 aaPredicted RBP7.44□□□□□ -1.22
CCDC60-205ENST00000546345 PIGSQ96S52 555 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 MYL10Q9BUA6 226 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 FAM126AQ9BYI3 521 aaPredicted RBP7.44□□□□□ -1.22
CCDC60-205ENST00000546345 PANK2Q9BZ23 570 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 ACBD3Q9H3P7 528 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 NRDE2Q9H7Z3 1164 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 PCMTD2Q9NV79 361 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 TBC1D13Q9NVG8 400 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 ZC3H7BQ9UGR2 993 aaKnown RBP7.44□□□□□ -1.22
CCDC60-205ENST00000546345 MAD2L2Q9UI95 211 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 SALL3Q9BXA9 1300 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 CEP192Q8TEP8 1941 aa7.44□□□□□ -1.22
CCDC60-205ENST00000546345 MYO18BQ8IUG5 2567 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 TMEM8BA6NDV4 472 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 KLRF2D3W0D1 207 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 MEIS2O14770 477 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 TEX28O15482 410 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 HYAL3O43820 417 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-205ENST00000546345 EFEMP2O95967 443 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 SSBP05455 408 aaKnown RBP eCLIP7.43□□□□□ -1.22
CCDC60-205ENST00000546345 GALTP07902 379 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 KLRC1P26715 233 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 ALDH7A1P49419 539 aaKnown RBP7.43□□□□□ -1.22
CCDC60-205ENST00000546345 CRYBB1P53674 252 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-205ENST00000546345 SLC44A4Q53GD3 710 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 SFRP5Q5T4F7 317 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 ARTNQ5T4W7 220 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 IL31Q6EBC2 164 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 USP17L6PQ6QN14 398 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 TPRG1Q6ZUI0 275 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 RNF168Q8IYW5 571 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-205ENST00000546345 LINC01465Q8N7H1 131 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 FAM181AQ8N9Y4 354 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 RNF169Q8NCN4 708 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 GIMAP8Q8ND71 665 aaPredicted RBP7.43□□□□□ -1.22
CCDC60-205ENST00000546345 CYB5D2Q8WUJ1 264 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 TNPO1Q92973 898 aaKnown RBP7.43□□□□□ -1.22
CCDC60-205ENST00000546345 CCDC74BQ96LY2 380 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 FAM227BQ96M60 508 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 MRPL9Q9BYD2 267 aaKnown RBP7.43□□□□□ -1.22
CCDC60-205ENST00000546345 KAT14Q9H8E8 782 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 GMIPQ9P107 970 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 CEP131Q9UPN4 1083 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 INPP5FQ9Y2H2 1132 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 UBIAD1Q9Y5Z9 338 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 ABCA7Q8IZY2 2146 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 COL1A2P08123 1366 aa7.43□□□□□ -1.22
CCDC60-205ENST00000546345 DENND4CQ5VZ89 1909 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 IGKV6D-21A0A0A0MT36 114 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 A0A0U1RQF3 1178 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 KIAA1324LA8MWY0 1029 aaPredicted RBP7.42□□□□□ -1.22
CCDC60-205ENST00000546345 B4E1Z4 1266 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 DNAJA2O60884 412 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 PCP11498 1178 aaKnown RBP7.42□□□□□ -1.22
CCDC60-205ENST00000546345 KLRC2P26717 231 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 ETV3P41162 512 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 OXCT1P55809 520 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 ACTR2P61160 394 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 NTHL1P78549 312 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 SATB1Q01826 763 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 SEC23AQ15436 765 aa7.42□□□□□ -1.22
CCDC60-205ENST00000546345 MSMPQ1L6U9 139 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms