RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 CTCFP49711 727 aaPredicted RBP16.63■□□□□ 0.25
LDLR-204ENST00000545707 TFAMQ00059 246 aaKnown RBP16.63■□□□□ 0.25
LDLR-204ENST00000545707 ACVR2BQ13705 512 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 MOGSQ13724 837 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 HHATQ5VTY9 493 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 DENND1BQ6P3S1 775 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 DRICH1Q6PGQ1 229 aaPredicted RBP16.63■□□□□ 0.25
LDLR-204ENST00000545707 TMEM35BQ8NCS4 154 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 FBF1Q8TES7 1133 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 GRAMD1AQ96CP6 724 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 CDHR1Q96JP9 859 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 TTC25Q96NG3 672 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 LRRC37BQ96QE4 947 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 FOXP3Q9BZS1 431 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 DRG1Q9Y295 367 aaKnown RBP16.63■□□□□ 0.25
LDLR-204ENST00000545707 TYROBPO43914 113 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 CST8O60676 142 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 EDF1O60869 148 aaKnown RBP16.62■□□□□ 0.25
LDLR-204ENST00000545707 CBX6O95503 412 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 RAP1GAPP47736 663 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 TNFAIP1Q13829 316 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 NAA25Q14CX7 972 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 TAF5Q15542 800 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 HIF1AQ16665 826 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 PPP1R15BQ5SWA1 713 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 TDRPQ86YL5 185 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 CCHCR1Q8TD31 782 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 PRPF31Q8WWY3 499 aaKnown RBP16.62■□□□□ 0.25
LDLR-204ENST00000545707 PCYT2Q99447 389 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 WDR83Q9BRX9 315 aaKnown RBP16.62■□□□□ 0.25
LDLR-204ENST00000545707 ACAD9Q9H845 621 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 NOP53Q9NZM5 478 aaKnown RBP16.62■□□□□ 0.25
LDLR-204ENST00000545707 NXF1Q9UBU9 619 aaKnown RBP16.62■□□□□ 0.25
LDLR-204ENST00000545707 PCSK1NQ9UHG2 260 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 CYTH4Q9UIA0 394 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 ARID2Q68CP9 1835 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 C3orf70A6NLC5 250 aaPredicted RBP16.62■□□□□ 0.25
LDLR-204ENST00000545707 MAGEB2O15479 319 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 MCL1Q07820 350 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 OVGP1Q12889 678 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 SETDB1Q15047 1291 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 PDK4Q16654 411 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 EEPD1Q7L9B9 569 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 RPAINQ86UA6 219 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 RHPN2Q8IUC4 686 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 RABGEF1Q9UJ41 708 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 NUMBLQ9Y6R0 609 aa16.62■□□□□ 0.25
LDLR-204ENST00000545707 ITGAVP06756 1048 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 T-ENOLP0DO92 83 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 CD19P15391 556 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 CCND1P24385 295 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 ADRA1DP25100 572 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 PSMA2P25787 234 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 MARK3P27448 753 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 NR1H3Q13133 447 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 MAPK6Q16659 721 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 PTPN20Q4JDL3 420 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 C3orf62Q6ZUJ4 267 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 OTOAQ7RTW8 1153 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 BRSK2Q8IWQ3 736 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 SLC35B2Q8TB61 432 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 PYROXD1Q8WU10 500 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 CPT1BQ92523 772 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 ZNF75CPQ92670 426 aaPredicted RBP16.61■□□□□ 0.25
LDLR-204ENST00000545707 NKD2Q969F2 451 aaPredicted RBP16.61■□□□□ 0.25
LDLR-204ENST00000545707 ZNF570Q96NI8 536 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 TEX13BQ9BXU2 312 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 PCDH9Q9HC56 1237 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 NPHS2Q9NP85 383 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 UBN1Q9NPG3 1134 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 PSMC3IPQ9P2W1 217 aaPredicted RBP16.61■□□□□ 0.25
LDLR-204ENST00000545707 NKX1-2Q9UD57 310 aaPredicted RBP16.61■□□□□ 0.25
LDLR-204ENST00000545707 POLIQ9UNA4 740 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 USH1CQ9Y6N9 552 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 ADCY3O60266 1144 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 FAM189A1O60320 539 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 YARSP54577 528 aaKnown RBP16.61■□□□□ 0.25
LDLR-204ENST00000545707 CDH8P55286 799 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 LACTBP83111 547 aaPredicted RBP16.61■□□□□ 0.25
LDLR-204ENST00000545707 PRKG1Q13976 671 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 PLEKHG4Q58EX7 1191 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 LRRC38Q5VT99 294 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 UNC45BQ8IWX7 931 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 THNSL1Q8IYQ7 743 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 CEP120Q8N960 986 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 PICK1Q9NRD5 415 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 DCTN4Q9UJW0 460 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 CEP83Q9Y592 693 aa16.61■□□□□ 0.25
LDLR-204ENST00000545707 LRCH4O75427 683 aa16.6■□□□□ 0.25
LDLR-204ENST00000545707 RPL22P35268 128 aaKnown RBP16.6■□□□□ 0.25
LDLR-204ENST00000545707 GEMIN4P57678 1058 aaKnown RBP16.6■□□□□ 0.25
LDLR-204ENST00000545707 ATP11AP98196 1134 aa16.6■□□□□ 0.25
LDLR-204ENST00000545707 CCDC15Q0P6D6 951 aa16.6■□□□□ 0.25
LDLR-204ENST00000545707 TRPC3Q13507 836 aa16.6■□□□□ 0.25
LDLR-204ENST00000545707 PIGHQ14442 188 aaPredicted RBP16.6■□□□□ 0.25
LDLR-204ENST00000545707 STXBP2Q15833 593 aa16.6■□□□□ 0.25
LDLR-204ENST00000545707 BBS9Q3SYG4 887 aa16.6■□□□□ 0.25
LDLR-204ENST00000545707 MICALL2Q8IY33 904 aa16.6■□□□□ 0.25
LDLR-204ENST00000545707 SCYL3Q8IZE3 742 aa16.6■□□□□ 0.25
LDLR-204ENST00000545707 LRRC71Q8N4P6 559 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms