RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 FBXO43Q4G163 708 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 SPATA1Q5VX52 437 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 C9orf57Q5W0N0 161 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 TXNDC8Q6A555 127 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 JADE1Q6IE81 842 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 LRRTM3Q86VH5 581 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 STKLD1Q8NE28 680 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 TTC16Q8NEE8 873 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 EZH1Q92800 747 aaPredicted RBP12.44□□□□□ -0.42
TMEM258-208ENST00000545210 GATA6Q92908 595 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 MMTAG2Q9BU76 263 aaKnown RBP12.44□□□□□ -0.42
TMEM258-208ENST00000545210 TPSD1Q9BZJ3 242 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 RPF1Q9H9Y2 349 aaKnown RBP12.44□□□□□ -0.42
TMEM258-208ENST00000545210 TMEM9BQ9NQ34 198 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 ABI2Q9NYB9 513 aaPredicted RBP12.44□□□□□ -0.42
TMEM258-208ENST00000545210 ZMYM5Q9UJ78 669 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 TBX20Q9UMR3 447 aa12.44□□□□□ -0.42
TMEM258-208ENST00000545210 FREM2Q5SZK8 3169 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 CDX4O14627 284 aaPredicted RBP12.43□□□□□ -0.42
TMEM258-208ENST00000545210 OGTO15294 1046 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 F11P03951 625 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 HAPLN1P10915 354 aaPredicted RBP12.43□□□□□ -0.42
TMEM258-208ENST00000545210 HMGA1P17096 107 aaKnown RBP12.43□□□□□ -0.42
TMEM258-208ENST00000545210 CSRP1P21291 193 aaKnown RBP12.43□□□□□ -0.42
TMEM258-208ENST00000545210 TRAPPC10P48553 1259 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 LIG4P49917 911 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 NEK4P51957 841 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 PMS2CLQ68D20 193 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 CPA6Q8N4T0 437 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 SPPL2BQ8TCT7 592 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 C2orf15Q8WU43 125 aaKnown RBP12.43□□□□□ -0.42
TMEM258-208ENST00000545210 KIF9Q9HAQ2 790 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 KCNG1Q9UIX4 513 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 NOL7Q9UMY1 257 aaKnown RBP12.43□□□□□ -0.42
TMEM258-208ENST00000545210 MAGED2Q9UNF1 606 aaPredicted RBP12.43□□□□□ -0.42
TMEM258-208ENST00000545210 PCDHB6Q9Y5E3 794 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 ADAMTS20P59510 1910 aa12.43□□□□□ -0.42
TMEM258-208ENST00000545210 NPHP3-ACAD11A0A0J9YXS1 232 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 PIRO00625 290 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 CYB561D2O14569 222 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 HNRNPDLO14979 420 aaKnown RBP12.42□□□□□ -0.42
TMEM258-208ENST00000545210 ADRB2P07550 413 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 NFICP08651 508 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 DDX6P26196 483 aaKnown RBP eCLIP12.42□□□□□ -0.423e-6■■□□□ 13.6
TMEM258-208ENST00000545210 TOB1P50616 345 aaPredicted RBP12.42□□□□□ -0.42
TMEM258-208ENST00000545210 NCKAP1LP55160 1127 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 IRX4P78413 519 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 PDGFRLQ15198 375 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 KYAT1Q16773 422 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 UAP1L1Q3KQV9 507 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 USP39Q53GS9 565 aaKnown RBP12.42□□□□□ -0.42
TMEM258-208ENST00000545210 KIAA1211LQ6NV74 962 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 CYP2U1Q7Z449 544 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 THEM5Q8N1Q8 247 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 DEFB124Q8NES8 71 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 TSTD1Q8NFU3 115 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 FBXO18Q8NFZ0 1043 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 ZCCHC14Q8WYQ9 949 aaKnown RBP12.42□□□□□ -0.42
TMEM258-208ENST00000545210 MRPS31Q92665 395 aaKnown RBP12.42□□□□□ -0.42
TMEM258-208ENST00000545210 CD101Q93033 1021 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 EXOC4Q96A65 974 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 ACDQ96AP0 544 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 TSPAN18Q96SJ8 248 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 PLIN2Q99541 437 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 PYM1Q9BRP8 204 aaKnown RBP12.42□□□□□ -0.42
TMEM258-208ENST00000545210 ECT2Q9H8V3 914 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 DUS2Q9NX74 493 aaKnown RBP12.42□□□□□ -0.42
TMEM258-208ENST00000545210 DSEQ9UL01 958 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 MYOFQ9NZM1 2061 aa12.42□□□□□ -0.42
TMEM258-208ENST00000545210 PCNX2A6NKB5 2137 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 ANO9A1A5B4 782 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 BCKDHBP21953 392 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 PAX3P23760 479 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 DHPSP49366 369 aaPredicted RBP12.41□□□□□ -0.42
TMEM258-208ENST00000545210 GPR15P49685 360 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 RING1Q06587 406 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 SMARCB1Q12824 385 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 MTF1Q14872 753 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 TMEM132DQ14C87 1099 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 SDHAF4Q5VUM1 108 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 WSCD1Q658N2 575 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 ANO7Q6IWH7 933 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 LRSAM1Q6UWE0 723 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 DTHD1Q6ZMT9 781 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 MON1AQ86VX9 555 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 CCDC83Q8IWF9 413 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 SYT2Q8N9I0 419 aaPredicted RBP12.41□□□□□ -0.42
TMEM258-208ENST00000545210 OSCP1Q8WVF1 389 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 ATP2A3Q93084 1043 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 SLC22A12Q96S37 553 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 CYP2S1Q96SQ9 504 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 MSTO1Q9BUK6 570 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 TMLHEQ9NVH6 421 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 PPP4R2Q9NY27 417 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 LARSQ9P2J5 1176 aaKnown RBP12.41□□□□□ -0.42
TMEM258-208ENST00000545210 CPSF3Q9UKF6 684 aaKnown RBP12.41□□□□□ -0.42
TMEM258-208ENST00000545210 PCDHB5Q9Y5E4 795 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 WNT6Q9Y6F9 365 aa12.41□□□□□ -0.42
TMEM258-208ENST00000545210 LOC400499M0QZD8 3231 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms