RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 C4orf50Q6ZRC1 276 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 SV2AQ7L0J3 742 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 ADSSL1Q8N142 457 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 FBXL6Q8N531 539 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 ST13P5Q8NFI4 369 aaPredicted RBP16.82■□□□□ 0.28
CCDC78-216ENST00000544996 DHTKD1Q96HY7 919 aaPredicted RBP16.82■□□□□ 0.28
CCDC78-216ENST00000544996 FUBP3Q96I24 572 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCDC78-216ENST00000544996 MRPL45Q9BRJ2 306 aaKnown RBP16.82■□□□□ 0.28
CCDC78-216ENST00000544996 PI4K2AQ9BTU6 479 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 IMPG2Q9BZV3 1241 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 MAN1B1Q9UKM7 699 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 TSC2P49815 1807 aa16.82■□□□□ 0.28
CCDC78-216ENST00000544996 MYBPHLA2RUH7 354 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 HCRTO43612 131 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 NARSO43776 548 aaKnown RBP16.81■□□□□ 0.28
CCDC78-216ENST00000544996 ATF6P18850 670 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 PIK3CAP42336 1068 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 PSMC1P62191 440 aaKnown RBP16.81■□□□□ 0.28
CCDC78-216ENST00000544996 TEAD2Q15562 447 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 CFAP221Q4G0U5 840 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 FAM171BQ6P995 826 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 TMC8Q8IU68 726 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 CCDC150Q8NCX0 1101 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 GIPC2Q8TF65 315 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 EEF2KMTQ96G04 330 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 GCNAQ96QF7 691 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 PKMYT1Q99640 499 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 LPIN3Q9BQK8 851 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 LRRC3Q9BY71 257 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 MFSD1Q9H3U5 465 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 SLITRK6Q9H5Y7 841 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 WNT16Q9UBV4 365 aa16.81■□□□□ 0.28
CCDC78-216ENST00000544996 A0A1W2PRU2 124 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 A8MXQ7 604 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 STX10O60499 249 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 ATP2C2O75185 946 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 ECI2O75521 394 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 VNN1O95497 513 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 CFHP08603 1231 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 TRIM49P0CI25 452 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 TRIM49CP0CI26 452 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 GJA1P17302 382 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 CYP2F1P24903 491 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 GTF2H1P32780 548 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 GCLMP48507 274 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 ARHGAP15Q53QZ3 475 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 FAM78AQ5JUQ0 283 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 C1orf220Q5T0J3 134 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 ANKRD40Q6AI12 368 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 SHKBP1Q8TBC3 707 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 MYCBPAPQ8TBZ2 947 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 SMARCD2Q92925 531 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 KXD1Q9BQD3 176 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 RPP25Q9BUL9 199 aaKnown RBP16.8■□□□□ 0.28
CCDC78-216ENST00000544996 ATXN3LQ9H3M9 355 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 ZFP14Q9HCL3 533 aa16.8■□□□□ 0.28
CCDC78-216ENST00000544996 MAGEC2Q9UBF1 373 aaPredicted RBP16.8■□□□□ 0.28
CCDC78-216ENST00000544996 SLC16A3O15427 465 aaKnown RBP16.79■□□□□ 0.28
CCDC78-216ENST00000544996 MOSPD3O75425 235 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 ASS1P00966 412 aaKnown RBP16.79■□□□□ 0.28
CCDC78-216ENST00000544996 HLA-DRAP01903 254 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 CSH1P0DML2 217 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 CSH2P0DML3 217 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 CCNE1P24864 410 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 GABRR2P28476 465 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 CDC25CP30307 473 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 CYP27A1Q02318 531 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 VSTM1Q6UX27 236 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 GPR152Q8TDT2 470 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 MYLPFQ96A32 169 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 ELSPBP1Q96BH3 223 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 ZSWIM3Q96MP5 696 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 ASB16Q96NS5 453 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 MMRN2Q9H8L6 949 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 TMEM8AQ9HCN3 771 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 ZNF334Q9HCZ1 680 aaPredicted RBP16.79■□□□□ 0.28
CCDC78-216ENST00000544996 CRTAC1Q9NQ79 661 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 SLC2A4RGQ9NR83 387 aa16.79■□□□□ 0.28
CCDC78-216ENST00000544996 BICDL2A1A5D9 508 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 BIN1O00499 593 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 PTPN1P18031 435 aaKnown RBP16.78■□□□□ 0.28
CCDC78-216ENST00000544996 MAGEA11P43364 429 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 PMS1P54277 932 aaKnown RBP16.78■□□□□ 0.28
CCDC78-216ENST00000544996 CDH8P55286 799 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 PPP3CAQ08209 521 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 MORC3Q14149 939 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 CAMK4Q16566 473 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 DDR2Q16832 855 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 CCDC142Q17RM4 750 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 MDH1BQ5I0G3 518 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 KRT39Q6A163 491 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 GAREM2Q75VX8 874 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 SCN4BQ8IWT1 228 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 SIX5Q8N196 739 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 ZSCAN18Q8TBC5 510 aaPredicted RBP16.78■□□□□ 0.28
CCDC78-216ENST00000544996 TAS1R2Q8TE23 839 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 E2F7Q96AV8 911 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 PCED1BQ96HM7 432 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 TNIP3Q96KP6 325 aa16.78■□□□□ 0.28
CCDC78-216ENST00000544996 SMYD3Q9H7B4 428 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms