RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 NKX1-2Q9UD57 310 aaPredicted RBP13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 DNALI1O14645 258 aaPredicted RBP13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 GSCP56915 257 aaPredicted RBP13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 SESN2P58004 480 aaPredicted RBP13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 KPNB1Q14974 876 aaKnown RBP13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 ZNF667Q5HYK9 610 aa13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 LMO3Q8TAP4 145 aa13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 DEPDC1BQ8WUY9 529 aa13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 MBOAT7Q96N66 472 aa13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 TRPC5Q9UL62 973 aaPredicted RBP13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 SLC12A4Q9UP95 1085 aa13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 NUB1Q9Y5A7 615 aa13.88□□□□□ -0.19
PCMTD1-208ENST00000544451 SPDYE2BA6NHP3 402 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 EXTL3O43909 919 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 SPDYE6P0CI01 402 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 GTF2BQ00403 316 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 NPNTQ6UXI9 565 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 OTOAQ7RTW8 1153 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 SAMD7Q7Z3H4 446 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 RFWD2Q8NHY2 731 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 MECRQ9BV79 373 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 INPP5FQ9Y2H2 1132 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 KRT36O76013 467 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 KCNA3P22001 575 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 ELK3P41970 407 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 KLHL38Q2WGJ6 581 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 TFDP3Q5H9I0 405 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 SLC9A9Q8IVB4 645 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 CCDC60Q8IWA6 550 aaPredicted RBP13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 ANKRD36BP1Q96IX9 119 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 TMEM120AQ9BXJ8 343 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 AAASQ9NRG9 546 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 hCG_2014768A0A024R1R8 64 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 MEI4A8MW99 385 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 CCDC22O60826 627 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 KRT37O76014 449 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 RFC5P40937 340 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 TNFSF9P41273 254 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 CCNHP51946 323 aaPredicted RBP13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 ZNF200P98182 395 aaPredicted RBP13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 ROR1Q01973 937 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 CHI3L2Q15782 390 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 POU5F2Q8N7G0 328 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 FAM13CQ8NE31 585 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 EXD1Q8NHP7 514 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 VPS11Q9H270 941 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 CISHQ9NSE2 258 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 NRBP2Q9NSY0 501 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 ZC3H7BQ9UGR2 993 aaKnown RBP13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 CHKBQ9Y259 395 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 A0A1B0GUL6 1792 aa13.87□□□□□ -0.19
PCMTD1-208ENST00000544451 FAM237BA0A1B0GVD1 139 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 FAM155BO75949 473 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 PTDSS1P48651 473 aaKnown RBP13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 EML3Q32P44 896 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 TRABD2AQ86V40 505 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 TRIM50Q86XT4 487 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 CRLF3Q8IUI8 442 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 EFCAB3Q8N7B9 438 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 FIZ1Q96SL8 496 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 CEP41Q9BYV8 373 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 ZCWPW1Q9H0M4 648 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 PACSIN3Q9UKS6 424 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 TELO2Q9Y4R8 837 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 H0YCG3 227 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 RFC1P35251 1148 aaPredicted RBP13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 GPC3P51654 580 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 BCAR1P56945 870 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 FAAP100Q0VG06 881 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 SLC15A2Q16348 729 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 MAPK6Q16659 721 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 DUOXA2Q1HG44 320 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 PCGF5Q86SE9 256 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 NDUFAF2Q8N183 169 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 DOT1LQ8TEK3 1739 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 BATF3Q9NR55 127 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 FAM49BQ9NUQ9 324 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 ZFATQ9P243 1243 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 PSTPIP1O43586 416 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 TRPA1O75762 1119 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 PDGFRAP16234 1089 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 TBXAS1P24557 533 aaPredicted RBP13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 SERPINB4P48594 390 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 MMRN1Q13201 1228 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 SNX30Q5VWJ9 437 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 ANKRD22Q5VYY1 191 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 SLFN12LQ6IEE8 588 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 MAP4K3Q8IVH8 894 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 C4orf19Q8IY42 314 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 PIP4K2CQ8TBX8 421 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 DDX27Q96GQ7 796 aaKnown RBP13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 RNPEPL1Q9HAU8 725 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 RIPK3Q9Y572 518 aa13.86□□□□□ -0.19
PCMTD1-208ENST00000544451 KDM4FA0A1W2PPD8 638 aa13.85□□□□□ -0.19
PCMTD1-208ENST00000544451 SPECC1L-ADORA2AF8WAN1 911 aa13.85□□□□□ -0.19
PCMTD1-208ENST00000544451 LIASO43766 372 aa13.85□□□□□ -0.19
PCMTD1-208ENST00000544451 CALB2P22676 271 aa13.85□□□□□ -0.19
PCMTD1-208ENST00000544451 KBTBD12Q3ZCT8 623 aa13.85□□□□□ -0.19
PCMTD1-208ENST00000544451 RFWD3Q6PCD5 774 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms