RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 FAM124BQ9H5Z6 455 aaPredicted RBP20.43■□□□□ 0.86
DDX55-211ENST00000544429 CYP3A43Q9HB55 503 aa20.43■□□□□ 0.86
DDX55-211ENST00000544429 DNMT3BQ9UBC3 853 aaKnown RBP20.43■□□□□ 0.86
DDX55-211ENST00000544429 SLC27A5Q9Y2P5 690 aa20.43■□□□□ 0.86
DDX55-211ENST00000544429 PCDHB5Q9Y5E4 795 aa20.43■□□□□ 0.86
DDX55-211ENST00000544429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.43■□□□□ 0.86
DDX55-211ENST00000544429 CLUHO75153 1309 aa20.43■□□□□ 0.86
DDX55-211ENST00000544429 N4BP1O75113 896 aaKnown RBP20.42■□□□□ 0.86
DDX55-211ENST00000544429 LRG1P02750 347 aa20.42■□□□□ 0.86
DDX55-211ENST00000544429 HAPLN1P10915 354 aaPredicted RBP20.42■□□□□ 0.86
DDX55-211ENST00000544429 ATF6P18850 670 aa20.42■□□□□ 0.86
DDX55-211ENST00000544429 EPHA5P54756 1037 aa20.42■□□□□ 0.86
DDX55-211ENST00000544429 TWF1Q12792 350 aa20.42■□□□□ 0.86
DDX55-211ENST00000544429 SCARA5Q6ZMJ2 495 aa20.42■□□□□ 0.86
DDX55-211ENST00000544429 GRASPQ7Z6J2 395 aaPredicted RBP20.42■□□□□ 0.86
DDX55-211ENST00000544429 OR6B3Q8NGW1 331 aa20.42■□□□□ 0.86
DDX55-211ENST00000544429 MYCBPAPQ8TBZ2 947 aa20.42■□□□□ 0.86
DDX55-211ENST00000544429 FUCA2Q9BTY2 467 aa20.42■□□□□ 0.86
DDX55-211ENST00000544429 LRRC3Q9BY71 257 aa20.42■□□□□ 0.86
DDX55-211ENST00000544429 DPEP3Q9H4B8 488 aa20.42■□□□□ 0.86
DDX55-211ENST00000544429 HCFC1R1Q9NWW0 138 aa20.42■□□□□ 0.86
DDX55-211ENST00000544429 AFPP02771 609 aaKnown RBP20.41■□□□□ 0.86
DDX55-211ENST00000544429 PDGFRBP09619 1106 aa20.41■□□□□ 0.86
DDX55-211ENST00000544429 PTPN1P18031 435 aaKnown RBP20.41■□□□□ 0.86
DDX55-211ENST00000544429 TUFMP49411 452 aaKnown RBP20.41■□□□□ 0.86
DDX55-211ENST00000544429 PSMC1P62191 440 aaKnown RBP20.41■□□□□ 0.86
DDX55-211ENST00000544429 TYRO3Q06418 890 aa20.41■□□□□ 0.86
DDX55-211ENST00000544429 MAPRE1Q15691 268 aaKnown RBP20.41■□□□□ 0.86
DDX55-211ENST00000544429 UNC93AQ86WB7 457 aa20.41■□□□□ 0.86
DDX55-211ENST00000544429 CRYBG2Q8N1P7 616 aa20.41■□□□□ 0.86
DDX55-211ENST00000544429 B3GALNT2Q8NCR0 500 aa20.41■□□□□ 0.86
DDX55-211ENST00000544429 TATDN2Q93075 761 aa20.41■□□□□ 0.86
DDX55-211ENST00000544429 PCED1BQ96HM7 432 aa20.41■□□□□ 0.86
DDX55-211ENST00000544429 PIDD1Q9HB75 910 aa20.41■□□□□ 0.86
DDX55-211ENST00000544429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.41■□□□□ 0.86
DDX55-211ENST00000544429 ABI2Q9NYB9 513 aaPredicted RBP20.41■□□□□ 0.86
DDX55-211ENST00000544429 DENND4CQ5VZ89 1909 aa20.41■□□□□ 0.86
DDX55-211ENST00000544429 A8MXQ7 604 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 SOAT2O75908 522 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 PTPN2P17706 415 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 MAGEA11P43364 429 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 NDST1P52848 882 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 NTHL1P78549 312 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 PLD1Q13393 1074 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 CDKAL1Q5VV42 579 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 CUL9Q8IWT3 2517 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 CCDC150Q8NCX0 1101 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 WHAMMQ8TF30 809 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 SAMSN1Q9NSI8 373 aaKnown RBP20.4■□□□□ 0.86
DDX55-211ENST00000544429 HMGXB4Q9UGU5 601 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 NFE2L3Q9Y4A8 694 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 ASB3Q9Y575 518 aa20.4■□□□□ 0.86
DDX55-211ENST00000544429 MYO10Q9HD67 2058 aa20.39■□□□□ 0.86
DDX55-211ENST00000544429 C2CD4DB7Z1M9 353 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 CILPO75339 1184 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 RHOP08100 348 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 CDR1P51861 262 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 WDR44Q5JSH3 913 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 PRSS36Q5K4E3 855 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 TMC8Q8IU68 726 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 FAM114A1Q8IWE2 563 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 ZDHHC14Q8IZN3 488 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 GJD3Q8N144 294 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 UBR7Q8N806 425 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 PSMG2Q969U7 264 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 MYLPFQ96A32 169 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 RPGRIP1Q96KN7 1286 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 ARID3AQ99856 593 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 LPIN3Q9BQK8 851 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 NR2E1Q9Y466 385 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 OBSL1O75147 1896 aa20.39■□□□□ 0.85
DDX55-211ENST00000544429 MICAL2O94851 1124 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 CYP2F1P24903 491 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 ALDH1A3P47895 512 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 EPHB3P54753 998 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 TPD52L1Q16890 204 aaPredicted RBP20.38■□□□□ 0.85
DDX55-211ENST00000544429 SLC5A9Q2M3M2 681 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 MGAT5BQ3V5L5 792 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 PABPC1LQ4VXU2 614 aaKnown RBP20.38■□□□□ 0.85
DDX55-211ENST00000544429 MDH1BQ5I0G3 518 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 MIIPQ5JXC2 388 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 VSTM1Q6UX27 236 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 C4orf50Q6ZRC1 276 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 PAQR9Q6ZVX9 377 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 SPATA2LQ8IUW3 424 aaPredicted RBP20.38■□□□□ 0.85
DDX55-211ENST00000544429 TNIP3Q96KP6 325 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 TWNKQ96RR1 684 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 SEPT5Q99719 369 aaPredicted RBP20.38■□□□□ 0.85
DDX55-211ENST00000544429 HSD3B7Q9H2F3 369 aa20.38■□□□□ 0.85
DDX55-211ENST00000544429 GTPBP10A4D1E9 387 aaKnown RBP20.37■□□□□ 0.85
DDX55-211ENST00000544429 NRG2O14511 850 aaPredicted RBP20.37■□□□□ 0.85
DDX55-211ENST00000544429 MOSPD3O75425 235 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 LETM1O95202 739 aaPredicted RBP20.37■□□□□ 0.85
DDX55-211ENST00000544429 FSHRP23945 695 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 CCR2P41597 374 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 CUL2Q13617 745 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 NCAPHQ15003 741 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 MAN2A1Q16706 1144 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 POTEHQ6S545 545 aa20.37■□□□□ 0.85
DDX55-211ENST00000544429 OTOP3Q7RTS5 596 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms