RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 C18orf8Q96DM3 657 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 PDCD10Q9BUL8 212 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 OSBPL8Q9BZF1 889 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 KCNQ3O43525 872 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 ASNA1O43681 348 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 IFNA14P01570 189 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 PSMC3P17980 439 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 GTF2E2P29084 291 aaKnown RBP10.81□□□□□ -0.68
PCDH9-204ENST00000544246 FRMD5Q7Z6J6 570 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 E2F7Q96AV8 911 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 INTS13Q9NVM9 706 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 PHF20L1A8MW92 1017 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 POTECB2RU33 542 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 EIF3HO15372 352 aaKnown RBP eCLIP10.81□□□□□ -0.68
PCDH9-204ENST00000544246 STX7O15400 261 aaKnown RBP10.81□□□□□ -0.68
PCDH9-204ENST00000544246 CYP26A1O43174 497 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 HPGDP15428 266 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 IL12RB1P42701 662 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 SARSP49591 514 aaKnown RBP10.81□□□□□ -0.68
PCDH9-204ENST00000544246 STX5Q13190 355 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 KPNB1Q14974 876 aaKnown RBP10.81□□□□□ -0.68
PCDH9-204ENST00000544246 EDRF1Q3B7T1 1238 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 RTKN2Q8IZC4 609 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 CCT8L2Q96SF2 557 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 ADI1Q9BV57 179 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 BCL2L14Q9BZR8 327 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 PHACTR1Q9C0D0 580 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 PAK5Q9P286 719 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 OVOS2A0A0G2JMS6 1433 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 OVOS2A0A0J9YW53 1432 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 OVOS2Q6IE36 1432 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 TADA2AO75478 443 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 GH2P01242 217 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 MMP10P09238 476 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 GPC1P35052 558 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 CCT8P50990 548 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 PFKFB3Q16875 520 aaPredicted RBP10.81□□□□□ -0.68
PCDH9-204ENST00000544246 DGKKQ5KSL6 1271 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 ARMC4Q5T2S8 1044 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 ADAM33Q9BZ11 813 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 EPC1Q9H2F5 836 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 ANTXR1Q9H6X2 564 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 FAM153AQ9UHL3 310 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 CRLS1Q9UJA2 301 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 VPS9D1Q9Y2B5 631 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 E7ENQ6 273 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 SERPINH1P50454 418 aaKnown RBP10.81□□□□□ -0.68
PCDH9-204ENST00000544246 EFNA5P52803 228 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 KLHL17Q6TDP4 642 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 EPHX4Q8IUS5 362 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 DENND6AQ8IWF6 608 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 MMGT1Q8N4V1 131 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 ZNF614Q8N883 585 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 VPS33BQ9H267 617 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 NDUFA13Q9P0J0 144 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 USP6P35125 1406 aa10.81□□□□□ -0.68
PCDH9-204ENST00000544246 SMAPO00193 183 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 KIAA0391O15091 583 aaKnown RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 KRT6BP04259 564 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 KCNJ6P48051 423 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 KRT6CP48668 564 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 CHRNB3Q05901 458 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 PIGHQ14442 188 aaPredicted RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 EZH2Q15910 746 aaKnown RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 PGS1Q32NB8 556 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 PDZK1Q5T2W1 519 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 DHX40Q8IX18 779 aaKnown RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 MARCH10Q8NA82 808 aaPredicted RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 LXNQ9BS40 222 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 SH3GLB1Q9Y371 365 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 ARIH1Q9Y4X5 557 aaPredicted RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 SLC16A3O15427 465 aaKnown RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 GSTM1P09488 218 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 PDK1Q15118 436 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 KRT73Q86Y46 540 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 RIBC1Q8N443 379 aaPredicted RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 IPMKQ8NFU5 416 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 MDM1Q8TC05 714 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 ZNF668Q96K58 619 aaPredicted RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 PACSIN1Q9BY11 444 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 SLC39A10Q9ULF5 831 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 ERBB3P21860 1342 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 ADGRA3Q8IWK6 1321 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 ZBTB39O15060 712 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 TTLL9Q3SXZ7 439 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 ZNF57Q68EA5 555 aaPredicted RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 C4orf22Q6V702 233 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 MACC1Q6ZN28 852 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 CYFIP1Q7L576 1253 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 MICALL2Q8IY33 904 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 TRIM51Q9BSJ1 452 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 SEC31BQ9NQW1 1179 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 CDC42BPGQ6DT37 1551 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 PRR36Q9H6K5 1346 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 STK36Q9NRP7 1315 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 FNTAP49354 379 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 ZCWPW2Q504Y3 356 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 TYW3Q6IPR3 259 aaKnown RBP10.8□□□□□ -0.68
PCDH9-204ENST00000544246 PLEKHA7Q6IQ23 1121 aa10.8□□□□□ -0.68
PCDH9-204ENST00000544246 COMMD2Q86X83 199 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms