RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 EFHBQ8N7U6 833 aa15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 B3GALNT2Q8NCR0 500 aa15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 KREMEN2Q8NCW0 462 aa15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 SLC22A17Q8WUG5 538 aa15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 JAKMIP2Q96AA8 810 aa15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 TMEM176AQ96HP8 235 aa15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 TWNKQ96RR1 684 aa15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 CRTAC1Q9NQ79 661 aa15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 CLDND1Q9NY35 253 aa15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 AFF4Q9UHB7 1163 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 DPP7Q9UHL4 492 aa15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 FHOD1Q9Y613 1164 aa15.43■□□□□ 0.06
TNFRSF1A-216ENST00000543995 TRANK1O15050 2925 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 A0A1W2PQC6 194 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 MTMR11A4FU01 709 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 LINC01565O15544 149 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 ATF2P15336 505 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 POLR2FP61218 127 aaKnown RBP15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 CYP27A1Q02318 531 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 NFE2Q16621 373 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 LIN9Q5TKA1 542 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 FAM171BQ6P995 826 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 C4orf50Q6ZRC1 276 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 SPATA2LQ8IUW3 424 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 WHAMMQ8TF30 809 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 CASP10Q92851 521 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 HEXIM2Q96MH2 286 aaKnown RBP15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 LPIN3Q9BQK8 851 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 TRIM5Q9C035 493 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 ELOVL4Q9GZR5 314 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 GANQ9H2C0 597 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 CYP4F11Q9HBI6 524 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 MAN1C1Q9NR34 630 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 TMLHEQ9NVH6 421 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 ABI2Q9NYB9 513 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 FBXW11Q9UKB1 542 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 AJAP1Q9UKB5 411 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 PCDHB5Q9Y5E4 795 aa15.42■□□□□ 0.06
TNFRSF1A-216ENST00000543995 NOL4O94818 638 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 ACO1P21399 889 aaKnown RBP15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 RAD23BP54727 409 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 DRAP1Q14919 205 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 CCDC142Q17RM4 750 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 UVSSAQ2YD98 709 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 DPY19L2P1Q6NXN4 242 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 LILRA6Q6PI73 481 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 CACNA2D4Q7Z3S7 1137 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 CRYBG2Q8N1P7 616 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 UBR7Q8N806 425 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 ATAD1Q8NBU5 361 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 RBBP8NLQ8NC74 664 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 MYCBPAPQ8TBZ2 947 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 C2orf15Q8WU43 125 aaKnown RBP15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 MYLPFQ96A32 169 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 PCED1BQ96HM7 432 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 PKMYT1Q99640 499 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 MED10Q9BTT4 135 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 NLRC4Q9NPP4 1024 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 FAM49BQ9NUQ9 324 aa15.41■□□□□ 0.06
TNFRSF1A-216ENST00000543995 EPHB6O15197 1021 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 C1RP00736 705 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 CD19P15391 556 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 DUSP4Q13115 394 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 ADAM15Q13444 863 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 MGAT5BQ3V5L5 792 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 CCDC149Q6ZUS6 474 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 C12orf29Q8N999 325 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 SLC4A11Q8NBS3 891 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 VN1R2Q8NFZ6 395 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 MAFAQ8NHW3 353 aaPredicted RBP15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 SLC7A14Q8TBB6 771 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 SPPL2BQ8TCT7 592 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 PABPC5Q96DU9 382 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 SPAG5Q96R06 1193 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 SEPT5Q99719 369 aaPredicted RBP15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 STK33Q9BYT3 514 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 PLEKHA4Q9H4M7 779 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 MAFFQ9ULX9 164 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 SLC27A5Q9Y2P5 690 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 DAAM1Q9Y4D1 1078 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 MYH10P35580 1976 aa15.4■□□□□ 0.06
TNFRSF1A-216ENST00000543995 RNF225M0QZC1 329 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SEC24AO95486 1093 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 VNN2O95498 520 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 GLP2RO95838 553 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 C8AP07357 584 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CCDC130P13994 396 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 KCNC3Q14003 757 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 PPM1LQ5SGD2 360 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SARM1Q6SZW1 724 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TMEM184AQ6ZMB5 413 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 TTC9BQ8N6N2 239 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 HDAC7Q8WUI4 952 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 SHC3Q92529 594 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 NAA15Q9BXJ9 866 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 DZANK1Q9NVP4 752 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CEP72Q9P209 647 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 ATP8B3O60423 1300 aa15.39■□□□□ 0.05
TNFRSF1A-216ENST00000543995 FOXN3O00409 490 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-216ENST00000543995 CLDN5O00501 218 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms