RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CAPN15O75808 1086 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 PROSCO94903 275 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 TUBBP07437 444 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 CCL5P13501 91 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 SELPP16109 830 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 RPL9P32969 192 aaKnown RBP9.87□□□□□ -0.83
GNE-206ENST00000543356 PTPN20Q4JDL3 420 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 C2CD6Q53TS8 623 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 PPP1R15BQ5SWA1 713 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 DCAF12L1Q5VU92 463 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 LLGL2Q6P1M3 1020 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 DNAJC24Q6P3W2 148 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 LRRC8DQ7L1W4 858 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 ZNF598Q86UK7 904 aaKnown RBP9.87□□□□□ -0.83
GNE-206ENST00000543356 ECHDC2Q86YB7 292 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 C3orf20Q8ND61 904 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.87□□□□□ -0.83
GNE-206ENST00000543356 WBP1LQ9NX94 342 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 SMARCAL1Q9NZC9 954 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 WDR35Q9P2L0 1181 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 CYTH4Q9UIA0 394 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 TMEM59LQ9UK28 342 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 L1RE1Q9UN81 338 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 PCDHA3Q9Y5H8 950 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 TSC2P49815 1807 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 MYO1FO00160 1098 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 SPOPO43791 374 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 CEP104O60308 925 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 HUS1O60921 280 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 SETSIPP0DME0 302 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 PAX3P23760 479 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 GPD2P43304 727 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 GABRB2P47870 512 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 PEX5P50542 639 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 SCNN1GP51170 649 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 GRIK3Q13003 919 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 PDCLQ13371 301 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 BFSP2Q13515 415 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 ADGRF2Q8IZF7 708 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 CRYBG2Q8N1P7 616 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 OR6B3Q8NGW1 331 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 RUBCNQ92622 972 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 DEFB118Q96PH6 123 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 SNX25Q9H3E2 840 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 PRDM16Q9HAZ2 1276 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 ZNF446Q9NWS9 450 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 MIOSQ9NXC5 875 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 IP6K2Q9UHH9 426 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 TSPAN16Q9UKR8 245 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 RAB21Q9UL25 225 aa9.87□□□□□ -0.83
GNE-206ENST00000543356 TDRD15B5MCY1 1934 aaKnown RBP9.87□□□□□ -0.83
GNE-206ENST00000543356 TMEM191CA6NGB0 347 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 A8MXQ7 604 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 PODXLO00592 558 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 FGFR1P11362 822 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 MTFR1Q15390 333 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 GOLGA7BQ2TAP0 167 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 PKDCCQ504Y2 493 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 DNAJC21Q5F1R6 531 aaKnown RBP9.86□□□□□ -0.83
GNE-206ENST00000543356 CCDC70Q6NSX1 233 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 FBXO38Q6PIJ6 1188 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 ACOT1Q86TX2 421 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 GPATCH11Q8N954 259 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.86□□□□□ -0.83
GNE-206ENST00000543356 ALG3Q92685 438 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 KRT35Q92764 455 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 UROC1Q96N76 676 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 FTHL17Q9BXU8 183 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 PARD6BQ9BYG5 372 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 MIS12Q9H081 205 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 RASSF4Q9H2L5 321 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 RBM12Q9NTZ6 932 aaKnown RBP9.86□□□□□ -0.83
GNE-206ENST00000543356 ARGLU1Q9NWB6 273 aaPredicted RBP9.86□□□□□ -0.83
GNE-206ENST00000543356 C9IYK1 514 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 PITPNM1O00562 1244 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 TRIM66O15016 1216 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 EOMESO95936 686 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 GNL1P36915 607 aaPredicted RBP9.86□□□□□ -0.83
GNE-206ENST00000543356 AARSP49588 968 aaKnown RBP eCLIP9.86□□□□□ -0.83
GNE-206ENST00000543356 AFF1P51825 1210 aaKnown RBP9.86□□□□□ -0.83
GNE-206ENST00000543356 FAM189BP81408 668 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 ZNF268Q14587 947 aaPredicted RBP9.86□□□□□ -0.83
GNE-206ENST00000543356 PHLDB2Q86SQ0 1253 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 KRT222Q8N1A0 295 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 LINC01599Q8WXQ3 324 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 C18orf8Q96DM3 657 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 DDX27Q96GQ7 796 aaKnown RBP9.86□□□□□ -0.83
GNE-206ENST00000543356 RNPC3Q96LT9 517 aaKnown RBP9.86□□□□□ -0.83
GNE-206ENST00000543356 CPXM1Q96SM3 734 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 NAP1L3Q99457 506 aaPredicted RBP9.86□□□□□ -0.83
GNE-206ENST00000543356 TRIM7Q9C029 511 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 EPC1Q9H2F5 836 aa9.86□□□□□ -0.83
GNE-206ENST00000543356 CCDC188H7C350 402 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 CYB561D2O14569 222 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 PSTPIP1O43586 416 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 ERBB2P04626 1255 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 PFKMP08237 780 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 RHOXF2BP0C7M4 288 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 HSPA6P17066 643 aa9.85□□□□□ -0.83
GNE-206ENST00000543356 MARCKSL1P49006 195 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms