RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 RGS7P49802 495 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 IRX1P78414 480 aaPredicted RBP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 ITKQ08881 620 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 SMAD1Q15797 465 aaKnown RBP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 DACT2Q5SW24 774 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 STYK1Q6J9G0 422 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 SLC30A9Q6PML9 568 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 CATSPER4Q7RTX7 472 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 PID1Q7Z2X4 250 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 PALB2Q86YC2 1186 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 MAP4K3Q8IVH8 894 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 SAMD3Q8N6K7 520 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 AGAP11Q8TF27 550 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 DCPSQ96C86 337 aaKnown RBP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 FRMD8Q9BZ67 464 aaPredicted RBP8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 ZNF408Q9H9D4 720 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 PCMTD2Q9NV79 361 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 FIS1Q9Y3D6 152 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 NUB1Q9Y5A7 615 aa8.59□□□□□ -1.03
PRKAB1-207ENST00000542698 M0QZ92 97 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 NAMPTP43490 491 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 SERPINB9P50453 376 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 JAM2P57087 298 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 PPATQ06203 517 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 RCN1Q15293 331 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 MTFR1Q15390 333 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 LRRC36Q1X8D7 754 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 MROH9Q5TGP6 573 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 FGD4Q96M96 766 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 CISHQ9NSE2 258 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 PIM2Q9P1W9 311 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 THEGQ9P2T0 379 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 KCPQ6ZWJ8 1503 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 OGTO15294 1046 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 OATP04181 439 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 ITGB5P18084 799 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 BAG6P46379 1132 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 AP1B1Q10567 949 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 THOC5Q13769 683 aaKnown RBP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 ANKRD20A4Q4UJ75 823 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 BOLA3Q53S33 107 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 ANKRD20A2Q5SQ80 823 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 ANKRD20A1Q5TYW2 823 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 TTC39BQ5VTQ0 682 aaPredicted RBP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 IER5Q5VY09 327 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 SPATA33Q96N06 139 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 TRIM56Q9BRZ2 755 aaKnown RBP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 MTMR12Q9C0I1 747 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 METTL5Q9NRN9 209 aaKnown RBP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 SLC12A6Q9UHW9 1150 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 USP20Q9Y2K6 914 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 CREB3O43889 395 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 ZSCAN5DPP0CG00 497 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 SERPINB4P48594 390 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 CRY2Q49AN0 593 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 DALRD3Q5D0E6 543 aaKnown RBP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 KRT80Q6KB66 452 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 ANO5Q75V66 913 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 DPP9Q86TI2 863 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 CDR2LQ86X02 465 aaPredicted RBP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 ARHGAP18Q8N392 663 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 ZCCHC9Q8N567 271 aaKnown RBP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 RNF169Q8NCN4 708 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 TCP10LQ8TDR4 215 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 PRCCQ92733 491 aaPredicted RBP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 TMEM237Q96Q45 408 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 FRMD8P1Q9BZ68 369 aaPredicted RBP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 FAM49AQ9H0Q0 323 aaPredicted RBP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 DONSONQ9NYP3 566 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 GRID1Q9ULK0 1009 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 SYNPO2Q9UMS6 1093 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 TRIM33Q9UPN9 1127 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 ACTL7BQ9Y614 415 aa8.58□□□□□ -1.04
PRKAB1-207ENST00000542698 A8MXQ7 604 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 C19orf81C9J6K1 198 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 UNC5CO95185 931 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 ADRB2P07550 413 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 MYL2P10916 166 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 KCNA3P22001 575 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 CHKAP35790 457 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 KPNA2P52292 529 aaKnown RBP8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 MYL6P60660 151 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 CCNA1P78396 465 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 MED21Q13503 144 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 PGM5Q15124 567 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 CHI3L2Q15782 390 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 ARL13BQ3SXY8 428 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 ACAD11Q709F0 780 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 LRRC71Q8N4P6 559 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 DCLK2Q8N568 766 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 MCUQ8NE86 351 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 UBA3Q8TBC4 463 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 KIF12Q96FN5 646 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 PWWP2AQ96N64 755 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 PCDHB18PQ96TA0 734 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 CGRRF1Q99675 332 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 SH3GL3Q99963 347 aa8.57□□□□□ -1.04
PRKAB1-207ENST00000542698 PXMP2Q9NR77 195 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms