RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 RGPD8O14715 1765 aaPredicted RBP11.5□□□□□ -0.57
ERBB2-204ENST00000541774 IFT172Q9UG01 1749 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 UTYO14607 1347 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 UBE4BO95155 1302 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 PFDN6O15212 129 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 AKR1B1P15121 316 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 CD19P15391 556 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 ZNF12P17014 697 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 SLC9A1P19634 815 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 COMTP21964 271 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 ATP2B4P23634 1241 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 BFSP2Q13515 415 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 TUBA3CQ13748 450 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 VPS72Q15906 364 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 CARTPTQ16568 116 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 TMEM214Q6NUQ4 689 aaKnown RBP11.5□□□□□ -0.57
ERBB2-204ENST00000541774 WNK4Q96J92 1243 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 CORO1BQ9BR76 489 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 EHMT1Q9H9B1 1298 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 ATP8A2Q9NTI2 1148 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 ZNF609O15014 1411 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 PJA2O43164 708 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 SPOPLQ6IQ16 392 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 PPCSQ9HAB8 311 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 STK39Q9UEW8 545 aa11.5□□□□□ -0.57
ERBB2-204ENST00000541774 BGNP21810 368 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 SMARCA1P28370 1054 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 ADD2P35612 726 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 CACNB3P54284 484 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 CYP4A11Q02928 519 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 LSAMPQ13449 338 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 NRF1Q16656 503 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 PRR23CQ6ZRP0 262 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 SLC13A5Q86YT5 568 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 HDAC11Q96DB2 347 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 CCSER1Q9C0I3 900 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 HSD3B7Q9H2F3 369 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 EBF3Q9H4W6 596 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 AP4B1Q9Y6B7 739 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 BAG6P46379 1132 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 OXCT1P55809 520 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 FCHO2Q0JRZ9 810 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 PTK7Q13308 1070 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 ACSBG2Q5FVE4 666 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 DARS2Q6PI48 645 aaKnown RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 FASTKD5Q7L8L6 764 aaKnown RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 TPH2Q8IWU9 490 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 MCUQ8NE86 351 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 GLMNQ92990 594 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 COPS7BQ9H9Q2 264 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 GPR108Q9NPR9 543 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 IPPQ9Y573 584 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 NEDD4P46934 1319 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 KLRF2D3W0D1 207 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 WDR47O94967 919 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 CAMTA2O94983 1202 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 ZBTB7AO95365 584 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 SOX5P35711 763 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 TOB1P50616 345 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 SNX16P57768 344 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 RAB15P59190 212 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 KRR1Q13601 381 aaKnown RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 CCDC85BQ15834 202 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 C1QTNF12Q5T7M4 302 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 SGMS1Q86VZ5 419 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 TUBGCP3Q96CW5 907 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 INPP4AQ96PE3 977 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 MRPL47Q9HD33 250 aaKnown RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 INPP5FQ9Y2H2 1132 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 USP20Q9Y2K6 914 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 USP32Q8NFA0 1604 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 FLT1P17948 1338 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 A0A0J9YVX5 310 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 CAPN8A6NHC0 703 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 PDZK1P1A8MUH7 402 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 UBE2Q2LH0YL09 131 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 GH1P01241 217 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 PROCP04070 461 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 HOXA7P31268 230 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 YARSP54577 528 aaKnown RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 TPTEP56180 551 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 RFWD3Q6PCD5 774 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 NUP93Q8N1F7 819 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 NLGN1Q8N2Q7 840 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 NT5C1BQ96P26 610 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 FOXP3Q9BZS1 431 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 C6orf203Q9P0P8 240 aaPredicted RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 DDX25Q9UHL0 483 aaKnown RBP11.49□□□□□ -0.57
ERBB2-204ENST00000541774 LNPEPQ9UIQ6 1025 aa11.49□□□□□ -0.57
ERBB2-204ENST00000541774 PHGDHO43175 533 aaKnown RBP11.48□□□□□ -0.57
ERBB2-204ENST00000541774 TRIM49P0CI25 452 aa11.48□□□□□ -0.57
ERBB2-204ENST00000541774 TRIM49CP0CI26 452 aa11.48□□□□□ -0.57
ERBB2-204ENST00000541774 PORP16435 677 aaPredicted RBP11.48□□□□□ -0.57
ERBB2-204ENST00000541774 DDX5P17844 614 aaKnown RBP11.48□□□□□ -0.57
ERBB2-204ENST00000541774 PBX1P40424 430 aa11.48□□□□□ -0.57
ERBB2-204ENST00000541774 TUBP50607 506 aa11.48□□□□□ -0.57
ERBB2-204ENST00000541774 AKR1D1P51857 326 aa11.48□□□□□ -0.57
ERBB2-204ENST00000541774 GEMIN4P57678 1058 aaKnown RBP11.48□□□□□ -0.57
ERBB2-204ENST00000541774 RAB14P61106 215 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms