RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 WHRNQ9P202 907 aa18.16■□□□□ 0.5
SPIDR-227ENST00000541342 TCP11X1B4DZS4 312 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 GPR25O00155 361 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 CLTAP09496 248 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 NCALDP61601 193 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 KCNJ2P63252 427 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 SNX1Q13596 522 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 MLXIPLQ9NP71 852 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 PRMT7Q9NVM4 692 aaPredicted RBP18.15■□□□□ 0.5
SPIDR-227ENST00000541342 DYNC1LI2O43237 492 aaPredicted RBP18.15■□□□□ 0.5
SPIDR-227ENST00000541342 ZNF865P0CJ78 1059 aaPredicted RBP18.15■□□□□ 0.5
SPIDR-227ENST00000541342 FAM187BQ17R55 369 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 TMEM132AQ24JP5 1023 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 OLFML2BQ68BL8 750 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 PWWP2AQ96N64 755 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 N4BP2L2Q92802 583 aaPredicted RBP18.15■□□□□ 0.5
SPIDR-227ENST00000541342 CPB2Q96IY4 423 aa18.15■□□□□ 0.5
SPIDR-227ENST00000541342 DNAJC17Q9NVM6 304 aaKnown RBP18.15■□□□□ 0.5
SPIDR-227ENST00000541342 CYP4X1Q8N118 509 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 TBC1D31Q96DN5 1066 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 SETD4Q9NVD3 440 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 UVRAGQ9P2Y5 699 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 BAIAP2L1Q9UHR4 511 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 A6NJR5 290 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 SLC10A3P09131 477 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 AP3M2P53677 418 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 CALCOCO2Q13137 446 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 SGO2Q562F6 1265 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 KIAA0319LQ8IZA0 1049 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 TMEM130Q8N3G9 435 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 SERPINB12Q96P63 405 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 PDZD7Q9H5P4 517 aa18.14■□□□□ 0.49
SPIDR-227ENST00000541342 USP15Q9Y4E8 981 aaPredicted RBP18.14■□□□□ 0.49
SPIDR-227ENST00000541342 ASS1P00966 412 aaKnown RBP18.13■□□□□ 0.49
SPIDR-227ENST00000541342 CXCL8P10145 99 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 SLC8A1P32418 973 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 MYL6P60660 151 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 CGB2Q6NT52 195 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 FAM155AB1AL88 458 aaPredicted RBP18.13■□□□□ 0.49
SPIDR-227ENST00000541342 RIPK1Q13546 671 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 TRIP13Q15645 432 aaPredicted RBP18.13■□□□□ 0.49
SPIDR-227ENST00000541342 DUOXA2Q1HG44 320 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 CLEC16AQ2KHT3 1053 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 GIMAP7Q8NHV1 300 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 NSRP1Q9H0G5 558 aaKnown RBP18.13■□□□□ 0.49
SPIDR-227ENST00000541342 HOMER3Q9NSC5 361 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 R3HDM2Q9Y2K5 976 aaKnown RBP18.13■□□□□ 0.49
SPIDR-227ENST00000541342 PCDHB2Q9Y5E7 798 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 TTC4O95801 387 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 CFHP08603 1231 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 ARF4P18085 180 aaPredicted RBP18.13■□□□□ 0.49
SPIDR-227ENST00000541342 CYP2B6P20813 491 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 TFAMQ00059 246 aaKnown RBP18.13■□□□□ 0.49
SPIDR-227ENST00000541342 ZNF268Q14587 947 aaPredicted RBP18.13■□□□□ 0.49
SPIDR-227ENST00000541342 KYNUQ16719 465 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 DAB2IPQ5VWQ8 1189 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 TMEM270Q6UE05 265 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 NLRP7Q8WX94 980 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 CNTN6Q9UQ52 1028 aa18.13■□□□□ 0.49
SPIDR-227ENST00000541342 UNGP13051 313 aaPredicted RBP18.12■□□□□ 0.49
SPIDR-227ENST00000541342 ITGA8P53708 1063 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 ACAD10Q6JQN1 1059 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 UBR7Q8N806 425 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 STAMBPL1Q96FJ0 436 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 GJD2Q9UKL4 321 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 PCDHB4Q9Y5E5 795 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 B4GALT4O60513 344 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 CTGFP29279 349 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 LLGL2Q6P1M3 1020 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 TLK2Q86UE8 772 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 ANKLE1Q8NAG6 615 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 PRKAG3Q9UGI9 489 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 ASIC3Q9UHC3 531 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 NEU2Q9Y3R4 380 aa18.12■□□□□ 0.49
SPIDR-227ENST00000541342 CFAP73A6NFT4 308 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 O00370 1275 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 EZRP15311 586 aaKnown RBP18.11■□□□□ 0.49
SPIDR-227ENST00000541342 TBXAS1P24557 533 aaPredicted RBP18.11■□□□□ 0.49
SPIDR-227ENST00000541342 PTK6Q13882 451 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 SURF1Q15526 300 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 CKAP2Q8WWK9 683 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 SNF8Q96H20 258 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 L3MBTL1Q9Y468 752 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 MROH7Q68CQ1 1323 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 GJB6O95452 261 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 F2P00734 622 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 ALADP13716 330 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 ITIH2P19823 946 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 MGAT5Q09328 741 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 BNIP1Q12981 228 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 HIC1Q14526 733 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 NUGGCQ68CJ6 796 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 FITM2Q8N6M3 262 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 GDAP1Q8TB36 358 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 RMDN2Q96LZ7 410 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 ECT2Q9H8V3 914 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 EBF2Q9HAK2 575 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 TSPAN1O60635 241 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 IGHA2P01877 340 aa18.11■□□□□ 0.49
SPIDR-227ENST00000541342 STAG3L1P0CL83 205 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms