RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 CC2D1AQ6P1N0 951 aaPredicted RBP28.93■■■□□ 2.22
CHFR-218ENST00000540963 GPBP1Q86WP2 473 aa28.93■■■□□ 2.22
CHFR-218ENST00000540963 MAB21L3Q8N8X9 362 aa28.93■■■□□ 2.22
CHFR-218ENST00000540963 PYM1Q9BRP8 204 aaKnown RBP28.93■■■□□ 2.22
CHFR-218ENST00000540963 CCL26Q9Y258 94 aa28.93■■■□□ 2.22
CHFR-218ENST00000540963 LAMA1P25391 3075 aa28.93■■■□□ 2.22
CHFR-218ENST00000540963 OTOL1A6NHN0 477 aaPredicted RBP28.92■■■□□ 2.22
CHFR-218ENST00000540963 RNF40O75150 1001 aa28.92■■■□□ 2.22
CHFR-218ENST00000540963 CSH1P0DML2 217 aa28.92■■■□□ 2.22
CHFR-218ENST00000540963 CSH2P0DML3 217 aa28.92■■■□□ 2.22
CHFR-218ENST00000540963 CCDC6Q16204 474 aa28.92■■■□□ 2.22
CHFR-218ENST00000540963 PLK5Q496M5 336 aa28.92■■■□□ 2.22
CHFR-218ENST00000540963 MON1AQ86VX9 555 aa28.92■■■□□ 2.22
CHFR-218ENST00000540963 NT5DC4Q86YG4 428 aa28.92■■■□□ 2.22
CHFR-218ENST00000540963 MRPS31Q92665 395 aaKnown RBP28.92■■■□□ 2.22
CHFR-218ENST00000540963 DPP3Q9NY33 737 aa28.92■■■□□ 2.22
CHFR-218ENST00000540963 ABI2Q9NYB9 513 aaPredicted RBP28.92■■■□□ 2.22
CHFR-218ENST00000540963 PCDHB5Q9Y5E4 795 aa28.92■■■□□ 2.22
CHFR-218ENST00000540963 EGFP01133 1207 aa28.91■■■□□ 2.22
CHFR-218ENST00000540963 NFE2Q16621 373 aaPredicted RBP28.91■■■□□ 2.22
CHFR-218ENST00000540963 WSCD1Q658N2 575 aa28.91■■■□□ 2.22
CHFR-218ENST00000540963 SYT13Q7L8C5 426 aa28.91■■■□□ 2.22
CHFR-218ENST00000540963 CALML4Q96GE6 196 aa28.91■■■□□ 2.22
CHFR-218ENST00000540963 EBF1Q9UH73 591 aa28.91■■■□□ 2.22
CHFR-218ENST00000540963 STYXL1Q9Y6J8 313 aa28.91■■■□□ 2.22
CHFR-218ENST00000540963 KPNA7A9QM74 516 aa28.9■■■□□ 2.22
CHFR-218ENST00000540963 RHOBTB1O94844 696 aa28.9■■■□□ 2.22
CHFR-218ENST00000540963 KCNK5O95279 499 aa28.9■■■□□ 2.22
CHFR-218ENST00000540963 CENPBP07199 599 aaPredicted RBP28.9■■■□□ 2.22
CHFR-218ENST00000540963 ACOT2P49753 483 aa28.9■■■□□ 2.22
CHFR-218ENST00000540963 ELF2Q15723 593 aa28.9■■■□□ 2.22
CHFR-218ENST00000540963 SV2CQ496J9 727 aa28.9■■■□□ 2.22
CHFR-218ENST00000540963 TRIM68Q6AZZ1 485 aa28.9■■■□□ 2.22
CHFR-218ENST00000540963 MCTP1Q6DN14 999 aa28.9■■■□□ 2.22
CHFR-218ENST00000540963 LEO1Q8WVC0 666 aaPredicted RBP28.9■■■□□ 2.22
CHFR-218ENST00000540963 FIZ1Q96SL8 496 aa28.9■■■□□ 2.22
CHFR-218ENST00000540963 P2RY13Q9BPV8 354 aa28.9■■■□□ 2.22
CHFR-218ENST00000540963 ST6GALNAC4Q9H4F1 302 aa28.9■■■□□ 2.22
CHFR-218ENST00000540963 UXTQ9UBK9 157 aaPredicted RBP28.9■■■□□ 2.22
CHFR-218ENST00000540963 NMT1P30419 496 aaKnown RBP28.89■■■□□ 2.22
CHFR-218ENST00000540963 PNPLA4P41247 253 aa28.89■■■□□ 2.22
CHFR-218ENST00000540963 GALK1P51570 392 aa28.89■■■□□ 2.22
CHFR-218ENST00000540963 RNF43Q68DV7 783 aa28.89■■■□□ 2.22
CHFR-218ENST00000540963 ADALQ6DHV7 355 aa28.89■■■□□ 2.22
CHFR-218ENST00000540963 CPA6Q8N4T0 437 aa28.89■■■□□ 2.22
CHFR-218ENST00000540963 ACDQ96AP0 544 aa28.89■■■□□ 2.22
CHFR-218ENST00000540963 ZNF560Q96MR9 790 aa28.89■■■□□ 2.22
CHFR-218ENST00000540963 DUSP15Q9H1R2 295 aaPredicted RBP28.89■■■□□ 2.22
CHFR-218ENST00000540963 ABCB6Q9NP58 842 aa28.89■■■□□ 2.22
CHFR-218ENST00000540963 AGO2Q9UKV8 859 aaKnown RBP28.89■■■□□ 2.22
CHFR-218ENST00000540963 KIAA1549LQ6ZVL6 1849 aa28.89■■■□□ 2.22
CHFR-218ENST00000540963 GJA4P35212 333 aa28.88■■■□□ 2.21
CHFR-218ENST00000540963 UBA7P41226 1012 aa28.88■■■□□ 2.21
CHFR-218ENST00000540963 TSPY1Q01534 308 aa28.88■■■□□ 2.21
CHFR-218ENST00000540963 TXNDC8Q6A555 127 aa28.88■■■□□ 2.21
CHFR-218ENST00000540963 CCDC26Q8TAB7 109 aa28.88■■■□□ 2.21
CHFR-218ENST00000540963 TRMT2BQ96GJ1 504 aaKnown RBP28.88■■■□□ 2.21
CHFR-218ENST00000540963 TMEM206Q9H813 350 aa28.88■■■□□ 2.21
CHFR-218ENST00000540963 FBRSL1Q9HCM7 1045 aaKnown RBP28.88■■■□□ 2.21
CHFR-218ENST00000540963 MYO16Q9Y6X6 1858 aa28.88■■■□□ 2.21
CHFR-218ENST00000540963 APBB3O95704 486 aa28.87■■■□□ 2.21
CHFR-218ENST00000540963 ARSAP15289 507 aa28.87■■■□□ 2.21
CHFR-218ENST00000540963 FAM160A1Q05DH4 1040 aa28.87■■■□□ 2.21
CHFR-218ENST00000540963 C11orf74Q86VG3 221 aa28.87■■■□□ 2.21
CHFR-218ENST00000540963 MYRFLQ96LU7 910 aa28.87■■■□□ 2.21
CHFR-218ENST00000540963 ECT2Q9H8V3 914 aa28.87■■■□□ 2.21
CHFR-218ENST00000540963 BLOC1S4Q9NUP1 217 aa28.87■■■□□ 2.21
CHFR-218ENST00000540963 NUP205Q92621 2012 aa28.87■■■□□ 2.21
CHFR-218ENST00000540963 ANKRD63C9JTQ0 380 aa28.86■■■□□ 2.21
CHFR-218ENST00000540963 TBCAO75347 108 aaKnown RBP28.86■■■□□ 2.21
CHFR-218ENST00000540963 IL18RAPO95256 599 aa28.86■■■□□ 2.21
CHFR-218ENST00000540963 KRT18P05783 430 aaKnown RBP28.86■■■□□ 2.21
CHFR-218ENST00000540963 RPL10AP62906 217 aaKnown RBP28.86■■■□□ 2.21
CHFR-218ENST00000540963 MTF1Q14872 753 aa28.86■■■□□ 2.21
CHFR-218ENST00000540963 RPLP0P6Q8NHW5 317 aa28.86■■■□□ 2.21
CHFR-218ENST00000540963 RIN3Q8TB24 985 aa28.86■■■□□ 2.21
CHFR-218ENST00000540963 ATP2A3Q93084 1043 aa28.86■■■□□ 2.21
CHFR-218ENST00000540963 HHIPQ96QV1 700 aa28.86■■■□□ 2.21
CHFR-218ENST00000540963 ACBD6Q9BR61 282 aa28.86■■■□□ 2.21
CHFR-218ENST00000540963 PRPF40AO75400 957 aaKnown RBP28.85■■■□□ 2.21
CHFR-218ENST00000540963 NOL4O94818 638 aa28.85■■■□□ 2.21
CHFR-218ENST00000540963 POSTNQ15063 836 aa28.85■■■□□ 2.21
CHFR-218ENST00000540963 OSCP1Q8WVF1 389 aa28.85■■■□□ 2.21
CHFR-218ENST00000540963 CD101Q93033 1021 aa28.85■■■□□ 2.21
CHFR-218ENST00000540963 CEP295Q9C0D2 2601 aa28.85■■■□□ 2.21
CHFR-218ENST00000540963 BCLAF3A2AJT9 711 aaKnown RBP28.84■■■□□ 2.21
CHFR-218ENST00000540963 PROS1P07225 676 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 CDR1P51861 262 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 DHX8Q14562 1220 aaKnown RBP28.84■■■□□ 2.21
CHFR-218ENST00000540963 DMC1Q14565 340 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 EFCAB13Q8IY85 973 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 SPATA18Q8TC71 538 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 LRRC15Q8TF66 581 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 RAD54LQ92698 747 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 HVCN1Q96D96 273 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 PI4K2AQ9BTU6 479 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 EDEM2Q9BV94 578 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 SMOC1Q9H4F8 434 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 ZHX3Q9H4I2 956 aa28.84■■■□□ 2.21
CHFR-218ENST00000540963 TMLHEQ9NVH6 421 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms