RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 ART4Q93070 314 aa18■□□□□ 0.47
EPB41L3-204ENST00000540638 DDX20Q9UHI6 824 aaKnown RBP18■□□□□ 0.47
EPB41L3-204ENST00000540638 TCP11X1B4DZS4 312 aa18■□□□□ 0.47
EPB41L3-204ENST00000540638 MEFVO15553 781 aaPredicted RBP18■□□□□ 0.47
EPB41L3-204ENST00000540638 NPTXRO95502 500 aa18■□□□□ 0.47
EPB41L3-204ENST00000540638 HOXC6P09630 235 aa18■□□□□ 0.47
EPB41L3-204ENST00000540638 AKAP5P24588 427 aa18■□□□□ 0.47
EPB41L3-204ENST00000540638 RDXP35241 583 aaKnown RBP18■□□□□ 0.47
EPB41L3-204ENST00000540638 YWHAEP62258 255 aaKnown RBP18■□□□□ 0.47
EPB41L3-204ENST00000540638 OTUD4Q01804 1114 aaKnown RBP18■□□□□ 0.47
EPB41L3-204ENST00000540638 AUHQ13825 339 aaKnown RBP18■□□□□ 0.47
EPB41L3-204ENST00000540638 FASTKD3Q14CZ7 662 aaKnown RBP18■□□□□ 0.47
EPB41L3-204ENST00000540638 SH3PXD2AQ5TCZ1 1133 aa18■□□□□ 0.47
EPB41L3-204ENST00000540638 RNF169Q8NCN4 708 aa18■□□□□ 0.47
EPB41L3-204ENST00000540638 ACAP3Q96P50 834 aa18■□□□□ 0.47
EPB41L3-204ENST00000540638 OSMRQ99650 979 aa18■□□□□ 0.47
EPB41L3-204ENST00000540638 SPDYE5A6NIY4 337 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 ARF4P18085 180 aaPredicted RBP17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 MAN1A1P33908 653 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 MMRN1Q13201 1228 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 SURF1Q15526 300 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 FAM71DQ8N9W8 422 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 NETO2Q8NC67 525 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 FAM149B1Q96BN6 582 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 CXCL11O14625 94 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 MED7O43513 233 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 PSTPIP1O43586 416 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 PDGFRAP16234 1089 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 MAGEA4P43358 317 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 DARS2Q6PI48 645 aaKnown RBP17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 RCOR2Q8IZ40 523 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 EXD1Q8NHP7 514 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 ALG13Q9NP73 1137 aaKnown RBP17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 FGFR1OP2Q9NVK5 253 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 NINJ2Q9NZG7 142 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 ASB14A6NK59 587 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 GH1P01241 217 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 NDST1P52848 882 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 PTPN11Q06124 597 aaPredicted RBP17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 PLEKHA7Q6IQ23 1121 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 CTAGE3PQ8IX95 158 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 OR6J1Q8NGC5 347 aa17.99■□□□□ 0.47
EPB41L3-204ENST00000540638 TMEM191CA6NGB0 347 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 TTC4O95801 387 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 P4HA1P13674 534 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 PECAM1P16284 738 aaPredicted RBP17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 PHF13Q86YI8 300 aaPredicted RBP17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 EIF1ADQ8N9N8 165 aaKnown RBP17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 SLITRK1Q96PX8 696 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 CNOT10Q9H9A5 744 aaKnown RBP17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 PRMT7Q9NVM4 692 aaPredicted RBP17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 SNTG2Q9NY99 539 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 SLC12A6Q9UHW9 1150 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 LTBP3Q9NS15 1303 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 CCNG2Q16589 344 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 NPNTQ6UXI9 565 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 PALM2Q8IXS6 379 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 CCDC197Q8NCU1 140 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 EPB41L4BQ9H329 900 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 STYXL1Q9Y6J8 313 aa17.98■□□□□ 0.47
EPB41L3-204ENST00000540638 TRAPPC3O43617 180 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 CNMDO75829 334 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 GBP2P32456 591 aaPredicted RBP17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 KCNV1Q6PIU1 500 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 PNMA8AQ86V59 439 aaPredicted RBP17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 KIF9Q9HAQ2 790 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 MAGED2Q9UNF1 606 aaPredicted RBP17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 TNS1Q9HBL0 1735 aaKnown RBP17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 MCL1Q07820 350 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 RAB6CQ53S08 254 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 TFDP3Q5H9I0 405 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 EXOC3L1Q86VI1 746 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 SCUBE3Q8IX30 993 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 RAB6CQ9H0N0 254 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 DPP3Q9NY33 737 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 WHRNQ9P202 907 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 ADGRA2Q96PE1 1338 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 HCRTO43612 131 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 MICAL2O94851 1124 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 AGTP01019 485 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 AP3M2P53677 418 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 DRG2P55039 364 aaKnown RBP17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 GAD2Q05329 585 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 PIGHQ14442 188 aaPredicted RBP17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 PACS2Q86VP3 889 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 SDCBP2Q9H190 292 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 HESX1Q9UBX0 185 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 CPA4Q9UI42 421 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 PNMA3Q9UL41 463 aa17.97■□□□□ 0.47
EPB41L3-204ENST00000540638 SSC5DA1L4H1 1573 aa17.96■□□□□ 0.47
EPB41L3-204ENST00000540638 PRPSAP2O60256 369 aa17.96■□□□□ 0.47
EPB41L3-204ENST00000540638 LCP1P13796 627 aa17.96■□□□□ 0.47
EPB41L3-204ENST00000540638 ASPAP45381 313 aa17.96■□□□□ 0.47
EPB41L3-204ENST00000540638 EIF3EP60228 445 aaKnown RBP17.96■□□□□ 0.47
EPB41L3-204ENST00000540638 YWHAGP61981 247 aaKnown RBP eCLIP17.96■□□□□ 0.47
EPB41L3-204ENST00000540638 MBTD1Q05BQ5 628 aa17.96■□□□□ 0.47
EPB41L3-204ENST00000540638 TRMT10CQ7L0Y3 403 aaKnown RBP17.96■□□□□ 0.47
EPB41L3-204ENST00000540638 WDTC1Q8N5D0 677 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms