RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 TSPAN18Q96SJ8 248 aa12.28□□□□□ -0.44
TMEM258-205ENST00000540434 CRISPLD1Q9H336 500 aa12.28□□□□□ -0.44
TMEM258-205ENST00000540434 RAB23Q9ULC3 237 aa12.28□□□□□ -0.44
TMEM258-205ENST00000540434 NME7Q9Y5B8 376 aa12.28□□□□□ -0.44
TMEM258-205ENST00000540434 BACE2Q9Y5Z0 518 aa12.28□□□□□ -0.44
TMEM258-205ENST00000540434 NRG2O14511 850 aaPredicted RBP12.27□□□□□ -0.45
TMEM258-205ENST00000540434 TM4SF5O14894 197 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 SYN3O14994 580 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 TRAPPC3O43617 180 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 OAZ2O95190 189 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 VNN1O95497 513 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 GLUD1P00367 558 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 C4BPAP04003 597 aaKnown RBP12.27□□□□□ -0.45
TMEM258-205ENST00000540434 TDGF1P13385 188 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 ARPP19P56211 112 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 ROR1Q01973 937 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 PRKCQQ04759 706 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 MTAPQ13126 283 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 CCDC6Q16204 474 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 CSRP2Q16527 193 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 WSCD1Q658N2 575 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 CEP135Q66GS9 1140 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 POTEHQ6S545 545 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 DSTYKQ6XUX3 929 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 TRAPPC11Q7Z392 1133 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 LRRTM3Q86VH5 581 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 OR10T2Q8NGX3 314 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 CGRRF1Q99675 332 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 DUSP9Q99956 384 aaKnown RBP12.27□□□□□ -0.45
TMEM258-205ENST00000540434 PRKD2Q9BZL6 878 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 KIAA1586Q9HCI6 787 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 PRMT8Q9NR22 394 aaPredicted RBP12.27□□□□□ -0.45
TMEM258-205ENST00000540434 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.27□□□□□ -0.454e-9■□□□□ 8.5
TMEM258-205ENST00000540434 CGNQ9P2M7 1197 aaKnown RBP12.27□□□□□ -0.45
TMEM258-205ENST00000540434 DPP7Q9UHL4 492 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 SSX2IPQ9Y2D8 614 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 F5P12259 2224 aa12.27□□□□□ -0.45
TMEM258-205ENST00000540434 AKAP13Q12802 2813 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 DSPP15924 2871 aaKnown RBP12.26□□□□□ -0.45
TMEM258-205ENST00000540434 SHISA7A6NL88 538 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 CYSRT1A8MQ03 144 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 KPNA7A9QM74 516 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 CYB561D2O14569 222 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 XPOTO43592 962 aaKnown RBP12.26□□□□□ -0.45
TMEM258-205ENST00000540434 ABLIM3O94929 683 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 SMC2O95347 1197 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 C1RP00736 705 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 KRT19P08727 400 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 TRIM49P0CI25 452 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 TRIM49CP0CI26 452 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 TNNI1P19237 187 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 NR2F2P24468 414 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 MAGEA9P43362 315 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 TAF6P49848 677 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 CLDN10P78369 228 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 PPP3CAQ08209 521 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 ADAM9Q13443 819 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 SF3A2Q15428 464 aaKnown RBP12.26□□□□□ -0.45
TMEM258-205ENST00000540434 NFIL3Q16649 462 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 CTXN3Q4LDR2 81 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 COBLL1Q53SF7 1204 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 TDRD10Q5VZ19 366 aaKnown RBP12.26□□□□□ -0.45
TMEM258-205ENST00000540434 SLC8B1Q6J4K2 584 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 RNF19BQ6ZMZ0 732 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 NT5DC4Q86YG4 428 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 WDR49Q8IV35 697 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 ZC3H3Q8IXZ2 948 aaKnown RBP12.26□□□□□ -0.45
TMEM258-205ENST00000540434 KDF1Q8NAX2 398 aaPredicted RBP12.26□□□□□ -0.45
TMEM258-205ENST00000540434 CCDC47Q96A33 483 aaKnown RBP12.26□□□□□ -0.45
TMEM258-205ENST00000540434 LPIN3Q9BQK8 851 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 TMEM121BQ9BXQ6 578 aaPredicted RBP12.26□□□□□ -0.45
TMEM258-205ENST00000540434 PLEKHA4Q9H4M7 779 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 ZDHHC7Q9NXF8 308 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 FBXW11Q9UKB1 542 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 L1RE1Q9UN81 338 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 ZFP37Q9Y6Q3 630 aaPredicted RBP12.26□□□□□ -0.45
TMEM258-205ENST00000540434 LAMA5O15230 3695 aa12.26□□□□□ -0.45
TMEM258-205ENST00000540434 CALUO43852 315 aaPredicted RBP12.25□□□□□ -0.45
TMEM258-205ENST00000540434 CYP11A1P05108 521 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 TMEM191BP0C7N4 346 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 HOXC13P31276 330 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 MCCD1P59942 119 aaPredicted RBP12.25□□□□□ -0.45
TMEM258-205ENST00000540434 MYL6P60660 151 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 NTHL1P78549 312 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 RBP5P82980 135 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 BFSP1Q12934 665 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 MYBPC2Q14324 1141 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 DUOXA2Q1HG44 320 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 SOWAHAQ2M3V2 549 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 TPRG1Q6ZUI0 275 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 ANKS3Q6ZW76 656 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 LIMS2Q7Z4I7 341 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 PDCL2Q8N4E4 241 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 TTC9BQ8N6N2 239 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 GOLGA5Q8TBA6 731 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 CACTINQ8WUQ7 758 aaKnown RBP12.25□□□□□ -0.45
TMEM258-205ENST00000540434 XYLT2Q9H1B5 865 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 CLSTN2Q9H4D0 955 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 PIDD1Q9HB75 910 aa12.25□□□□□ -0.45
TMEM258-205ENST00000540434 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms