RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 REV3LO60673 3130 aa12.71□□□□□ -0.37
CYB561A3-215ENST00000540317 PTPRJQ12913 1337 aa12.71□□□□□ -0.38
CYB561A3-215ENST00000540317 CCDC188H7C350 402 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 ASS1P00966 412 aaKnown RBP12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 TMEM191BP0C7N4 346 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 ACO1P21399 889 aaKnown RBP12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 KCNA5P22460 613 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 TNFRSF8P28908 595 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 PCBP1Q15365 356 aaKnown RBP eCLIP12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 TWF2Q6IBS0 349 aaKnown RBP12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 C8orf74Q6P047 294 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 CATSPER4Q7RTX7 472 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 PALB2Q86YC2 1186 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 UBL4BQ8N7F7 174 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 ARHGEF26Q96DR7 871 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 VCPIP1Q96JH7 1222 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 FUT8Q9BYC5 575 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 LMAN2LQ9H0V9 348 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 CARD9Q9H257 536 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 IFT122Q9HBG6 1241 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 CHST12Q9NRB3 414 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 TMEM59LQ9UK28 342 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 L1RE1Q9UN81 338 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 PACSIN2Q9UNF0 486 aaPredicted RBP12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 PCDHB4Q9Y5E5 795 aa12.7□□□□□ -0.38
CYB561A3-215ENST00000540317 COL4A6Q14031 1691 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 A0A0U1RQF3 1178 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 TTLL13PA6NNM8 815 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 MAP2K7O14733 419 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 HOXA2O43364 376 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 CEP104O60308 925 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 SEC31AO94979 1220 aaKnown RBP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 ITGB1P05556 798 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 TNFSF9P41273 254 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 CCNI2Q6ZMN8 369 aaPredicted RBP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 DNAAF5Q86Y56 855 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 ECHDC2Q86YB7 292 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 OR5B17Q8NGF7 314 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 SPPL3Q8TCT6 385 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 MICAL1Q8TDZ2 1067 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 ZNF653Q96CK0 615 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 MS4A14Q96JA4 679 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 CDT1Q9H211 546 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 IGFLR1Q9H665 355 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 ASB7Q9H672 318 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 APOBEC3GQ9HC16 384 aaKnown RBP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 AVENQ9NQS1 362 aaPredicted RBP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 STIM2Q9P246 746 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 PIN4Q9Y237 131 aaKnown RBP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 MYO7AQ13402 2215 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 COL4A4P53420 1690 aaPredicted RBP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 TNFRSF10AO00220 468 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 EOMESO95936 686 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 UNGP13051 313 aaPredicted RBP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 NT5DC4Q86YG4 428 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 CD302Q8IX05 232 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 IFT20Q8IY31 132 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 THNSL1Q8IYQ7 743 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 EIF1ADQ8N9N8 165 aaKnown RBP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 POF1BQ8WVV4 589 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 NECAB3Q96P71 396 aaPredicted RBP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 CASD1Q96PB1 797 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 ADPGKQ9BRR6 497 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 LRRC1Q9BTT6 524 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 NIF3L1Q9GZT8 377 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 VIPAS39Q9H9C1 493 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 RBM12Q9NTZ6 932 aaKnown RBP12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 HCSTQ9UBK5 93 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 LCMT1Q9UIC8 334 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 NUB1Q9Y5A7 615 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 ALG6Q9Y672 507 aa12.69□□□□□ -0.38
CYB561A3-215ENST00000540317 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 DDX3YO15523 660 aaKnown RBP12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 B4GALT5O43286 388 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 ERLIN2O94905 339 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 CYP1A1P04798 512 aaPredicted RBP12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 DNAJB1P25685 340 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 GNA15P30679 374 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 NSFP46459 744 aaKnown RBP12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 DNA2P51530 1060 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 TFAMQ00059 246 aaKnown RBP12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 CENPCQ03188 943 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 AMHR2Q16671 573 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 SEZ6Q53EL9 994 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 LIN9Q5TKA1 542 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 TMEM270Q6UE05 265 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 MCOLN2Q8IZK6 566 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 UBR7Q8N806 425 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 RBBP8NLQ8NC74 664 aaPredicted RBP12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 ZNF564Q8TBZ8 553 aaPredicted RBP12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 PPP2R3CQ969Q6 453 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 ARID3AQ99856 593 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 NUP85Q9BW27 656 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 MTMR12Q9C0I1 747 aa12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 FAM124BQ9H5Z6 455 aaPredicted RBP12.68□□□□□ -0.38
CYB561A3-215ENST00000540317 MINDY3Q9H8M7 445 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms