RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 MAN1A1P33908 653 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 GUCY2FP51841 1108 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 DR1Q01658 176 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 DHX34Q14147 1143 aaKnown RBP10.21□□□□□ -0.78
CLIP1-212ENST00000540304 LEKR1Q6ZMV7 388 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 RAB17Q9H0T7 212 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 LHX5Q9H2C1 402 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 UTP11Q9Y3A2 253 aaKnown RBP10.21□□□□□ -0.78
CLIP1-212ENST00000540304 PDCD11Q14690 1871 aaKnown RBP10.21□□□□□ -0.78
CLIP1-212ENST00000540304 C17orf102A2RUQ5 167 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 CILPO75339 1184 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 GNAT1P11488 350 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 CTGFP29279 349 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 CHRNA3P32297 505 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 TM4SF4P48230 202 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 YARSP54577 528 aaKnown RBP10.21□□□□□ -0.78
CLIP1-212ENST00000540304 PURAQ00577 322 aaKnown RBP10.21□□□□□ -0.78
CLIP1-212ENST00000540304 HLTFQ14527 1009 aaKnown RBP eCLIP10.21□□□□□ -0.78
CLIP1-212ENST00000540304 SNX17Q15036 470 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 DAB2IPQ5VWQ8 1189 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 ERICH1Q86X53 443 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 TTC39CQ8N584 583 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 WDTC1Q8N5D0 677 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 PRELID2Q8N945 189 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 C3orf20Q8ND61 904 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 ARMC2Q8NEN0 867 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 FAM71BQ8TC56 605 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 RIN2Q8WYP3 895 aaPredicted RBP10.21□□□□□ -0.78
CLIP1-212ENST00000540304 SEC14L1Q92503 715 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 SNX27Q96L92 541 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 EIF2AQ9BY44 585 aaKnown RBP10.21□□□□□ -0.78
CLIP1-212ENST00000540304 CELF4Q9BZC1 486 aaKnown RBP10.21□□□□□ -0.78
CLIP1-212ENST00000540304 SNTG2Q9NY99 539 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 IP6K2Q9UHH9 426 aa10.21□□□□□ -0.78
CLIP1-212ENST00000540304 TCRBV5S1A1TA0A578 114 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 FAM187AA6NFU0 413 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 CA12O43570 354 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 PSTPIP1O43586 416 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 KPNA6O60684 536 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 DUSP11O75319 330 aaKnown RBP10.2□□□□□ -0.78
CLIP1-212ENST00000540304 HOXC8P31273 242 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 ACTN2P35609 894 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 FCGRTP55899 365 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 TAP1Q03518 808 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 PTPN11Q06124 597 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-212ENST00000540304 CYP1B1Q16678 543 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 DENND1BQ6P3S1 775 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 DNAJC24Q6P3W2 148 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 RHOT1Q8IXI2 618 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 MREGQ8N565 214 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 C7orf31Q8N865 590 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 SLC4A11Q8NBS3 891 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 TMEM176AQ96HP8 235 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 PLEKHG4BQ96PX9 1271 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 ELOVL4Q9GZR5 314 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 STRIP2Q9ULQ0 834 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 ABT1Q9ULW3 272 aaKnown RBP10.2□□□□□ -0.78
CLIP1-212ENST00000540304 TMEM191CA6NGB0 347 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 FAM153BP0C7A2 387 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 IMPDH2P12268 514 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 ECHS1P30084 290 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 LMAN1P49257 510 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 ZNF200P98182 395 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-212ENST00000540304 INCA1Q0VD86 236 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 MYO1EQ12965 1108 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 FAM153CQ494X1 144 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 ZDHHC14Q8IZN3 488 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 TRPV1Q8NER1 839 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 MAGOHBQ96A72 148 aaKnown RBP10.2□□□□□ -0.78
CLIP1-212ENST00000540304 DDX27Q96GQ7 796 aaKnown RBP10.2□□□□□ -0.78
CLIP1-212ENST00000540304 RUNDC3BQ96NL0 473 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 TWNKQ96RR1 684 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 TACO1Q9BSH4 297 aaKnown RBP10.2□□□□□ -0.78
CLIP1-212ENST00000540304 KIF9Q9HAQ2 790 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 FAM114A2Q9NRY5 505 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 HMGXB4Q9UGU5 601 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 PCYOX1Q9UHG3 505 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 FAM153AQ9UHL3 310 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 RASAL2Q9UJF2 1139 aa10.2□□□□□ -0.78
CLIP1-212ENST00000540304 TCRBV7S2A1N4TA0A589 114 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 FSCN2O14926 492 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 ZSCAN9O15535 394 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-212ENST00000540304 DAPK3O43293 454 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 GJB6O95452 261 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 VDRP11473 427 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 HNRNPH1P31943 449 aaKnown RBP10.19□□□□□ -0.78
CLIP1-212ENST00000540304 CRYBB1P53674 252 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-212ENST00000540304 RPL7AP62424 266 aaKnown RBP10.19□□□□□ -0.78
CLIP1-212ENST00000540304 ORC1Q13415 861 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 SIX1Q15475 284 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-212ENST00000540304 PPP1R15BQ5SWA1 713 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 ALS2CLQ60I27 953 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 TADA2BQ86TJ2 420 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 DDX42Q86XP3 938 aaKnown RBP eCLIP10.19□□□□□ -0.78
CLIP1-212ENST00000540304 C12orf50Q8NA57 414 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-212ENST00000540304 TSEN2Q8NCE0 465 aaKnown RBP10.19□□□□□ -0.78
CLIP1-212ENST00000540304 TMEM40Q8WWA1 233 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 MAIP1Q8WWC4 291 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 C18orf8Q96DM3 657 aa10.19□□□□□ -0.78
CLIP1-212ENST00000540304 TRIM51Q9BSJ1 452 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms