RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 TDP1Q9NUW8 608 aa11.29□□□□□ -0.6
SSPN-207ENST00000540266 PCDHA4Q9UN74 947 aa11.29□□□□□ -0.6
SSPN-207ENST00000540266 NUB1Q9Y5A7 615 aa11.29□□□□□ -0.6
SSPN-207ENST00000540266 NID2Q14112 1375 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 MARCH6O60337 910 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 SOAT2O75908 522 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 ALDH1A2O94788 518 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 TPM2P07951 284 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 CDC25CP30307 473 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 EIF2S3P41091 472 aaKnown RBP11.28□□□□□ -0.6
SSPN-207ENST00000540266 KCNA1Q09470 495 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 BECN1Q14457 450 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 ZNF268Q14587 947 aaPredicted RBP11.28□□□□□ -0.6
SSPN-207ENST00000540266 LMBRD2Q68DH5 695 aaPredicted RBP11.28□□□□□ -0.6
SSPN-207ENST00000540266 PPP4R3AQ6IN85 833 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 ZBTB8OSQ8IWT0 167 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 CPA6Q8N4T0 437 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 CCDC33Q8N5R6 958 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
SSPN-207ENST00000540266 OSCP1Q8WVF1 389 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 BSNDQ8WZ55 320 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 CALR3Q96L12 384 aaKnown RBP11.28□□□□□ -0.6
SSPN-207ENST00000540266 DCBLD2Q96PD2 775 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 TMUB1Q9BVT8 246 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 C2orf40Q9H1Z8 148 aa11.28□□□□□ -0.6
SSPN-207ENST00000540266 PCDH15Q96QU1 1955 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 TEX51A0A1B0GUA7 166 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 A0A1W2PQD8 194 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 MTMR11A4FU01 709 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 OR6C75A6NL08 312 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 AP5Z1O43299 807 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 LARGE1O95461 756 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 HMGB1P09429 215 aaKnown RBP11.27□□□□□ -0.61
SSPN-207ENST00000540266 XRCC6P12956 609 aaKnown RBP eCLIP11.27□□□□□ -0.61
SSPN-207ENST00000540266 MARCKSP29966 332 aaPredicted RBP11.27□□□□□ -0.61
SSPN-207ENST00000540266 MCM4P33991 863 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 GRM5P41594 1212 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 AARSP49588 968 aaKnown RBP eCLIP11.27□□□□□ -0.61
SSPN-207ENST00000540266 NLRP5P59047 1200 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 YWHAHQ04917 246 aaPredicted RBP11.27□□□□□ -0.61
SSPN-207ENST00000540266 BYSLQ13895 437 aaKnown RBP11.27□□□□□ -0.61
SSPN-207ENST00000540266 EML3Q32P44 896 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 CC2D1AQ6P1N0 951 aaPredicted RBP11.27□□□□□ -0.61
SSPN-207ENST00000540266 DBX2Q6ZNG2 339 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 MAB21L3Q8N8X9 362 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 CEP120Q8N960 986 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 FCRL3Q96P31 734 aaPredicted RBP11.27□□□□□ -0.61
SSPN-207ENST00000540266 EIF2AK1Q9BQI3 630 aaKnown RBP11.27□□□□□ -0.61
SSPN-207ENST00000540266 LPIN3Q9BQK8 851 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 RNF26Q9BY78 433 aaPredicted RBP11.27□□□□□ -0.61
SSPN-207ENST00000540266 KIF9Q9HAQ2 790 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 PTPRHQ9HD43 1115 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 CNTN3Q9P232 1028 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 THADAQ6YHU6 1953 aa11.27□□□□□ -0.61
SSPN-207ENST00000540266 ATG2BQ96BY7 2078 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 PTPN13Q12923 2485 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 A0A087WWV3 80 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 E9PAM4 449 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 SGK1O00141 431 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 F11P03951 625 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 ATXN1LP0C7T5 689 aaKnown RBP11.26□□□□□ -0.61
SSPN-207ENST00000540266 ATF6P18850 670 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 DDX6P26196 483 aaKnown RBP eCLIP11.26□□□□□ -0.61
SSPN-207ENST00000540266 AVPR1AP37288 418 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 OPRD1P41143 372 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 SEC13P55735 322 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 MRPS21P82921 87 aaKnown RBP11.26□□□□□ -0.61
SSPN-207ENST00000540266 ZNF33AQ06730 810 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 SCRN1Q12765 414 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 MYBPC2Q14324 1141 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 SMAD1Q15797 465 aaKnown RBP11.26□□□□□ -0.61
SSPN-207ENST00000540266 INF2Q27J81 1249 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 GAB4Q2WGN9 574 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 ATF7IP2Q5U623 682 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 NCAPH2Q6IBW4 605 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 MAEAQ7L5Y9 396 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 KRT25Q7Z3Z0 450 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 MON1AQ86VX9 555 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 SLC41A1Q8IVJ1 513 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 BLIDQ8IZY5 108 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 GALNT15Q8N3T1 639 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 DEFB119Q8N690 84 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 IL17RCQ8NAC3 791 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 PIGOQ8TEQ8 1089 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 PI4K2AQ9BTU6 479 aa11.26□□□□□ -0.61
SSPN-207ENST00000540266 TOPORSQ9NS56 1045 aaPredicted RBP11.26□□□□□ -0.61
SSPN-207ENST00000540266 DUS2Q9NX74 493 aaKnown RBP11.26□□□□□ -0.61
SSPN-207ENST00000540266 TIMM13Q9Y5L4 95 aaPredicted RBP11.26□□□□□ -0.61
SSPN-207ENST00000540266 PTPRQQ9UMZ3 2332 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 A0A0A0MRY4 1105 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 FAM149AA5PLN7 773 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 ADAM23O75077 832 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 WISP1O95388 367 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 HMGA1P17096 107 aaKnown RBP11.25□□□□□ -0.61
SSPN-207ENST00000540266 NMT1P30419 496 aaKnown RBP11.25□□□□□ -0.61
SSPN-207ENST00000540266 TUFMP49411 452 aaKnown RBP11.25□□□□□ -0.61
SSPN-207ENST00000540266 TERF1P54274 439 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 YARSP54577 528 aaKnown RBP11.25□□□□□ -0.61
SSPN-207ENST00000540266 NLRP12P59046 1061 aa11.25□□□□□ -0.61
SSPN-207ENST00000540266 FOXK1P85037 733 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms