RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 LRRN2O75325 713 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 CYP2F1P24903 491 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 RPL13P26373 211 aaKnown RBP16.13■□□□□ 0.17
UBE3B-212ENST00000540230 ATICP31939 592 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 PSMC2P35998 433 aaKnown RBP16.13■□□□□ 0.17
UBE3B-212ENST00000540230 RAP1GAPP47736 663 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 GCLMP48507 274 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 AP3M2P53677 418 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 CDH8P55286 799 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 TNNC1P63316 161 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 SMARCB1Q12824 385 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 TEAD2Q15562 447 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 ZNF699Q32M78 642 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 STXBP5Q5T5C0 1151 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 CYP4A22Q5TCH4 519 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 SPOPLQ6IQ16 392 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 FAM171BQ6P995 826 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 SCARA5Q6ZMJ2 495 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 INTS8Q75QN2 995 aaKnown RBP16.13■□□□□ 0.17
UBE3B-212ENST00000540230 GAREM2Q75VX8 874 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 C2orf15Q8WU43 125 aaKnown RBP16.13■□□□□ 0.17
UBE3B-212ENST00000540230 SYAP1Q96A49 352 aaPredicted RBP16.13■□□□□ 0.17
UBE3B-212ENST00000540230 KXD1Q9BQD3 176 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 DPEP3Q9H4B8 488 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 MMRN2Q9H8L6 949 aa16.13■□□□□ 0.17
UBE3B-212ENST00000540230 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.13■□□□□ 0.172e-9■■■■■ 409.2
UBE3B-212ENST00000540230 NCANO14594 1321 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 ZDBF2Q9HCK1 2354 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 COL4A3Q01955 1670 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 IKBKBO14920 756 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 TACC1O75410 805 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 HLA-DRAP01903 254 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 CFHP08603 1231 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 FCARP24071 287 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 PCSK1P29120 753 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 TUFMP49411 452 aaKnown RBP16.12■□□□□ 0.17
UBE3B-212ENST00000540230 NFE2Q16621 373 aaPredicted RBP16.12■□□□□ 0.17
UBE3B-212ENST00000540230 BMP8AQ7Z5Y6 402 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 ZC3H3Q8IXZ2 948 aaKnown RBP16.12■□□□□ 0.17
UBE3B-212ENST00000540230 MYLPFQ96A32 169 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 PBXIP1Q96AQ6 731 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 PLA2G2FQ9BZM2 168 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 CDH9Q9ULB4 789 aa16.12■□□□□ 0.17
UBE3B-212ENST00000540230 OBSL1O75147 1896 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 KMT2EQ8IZD2 1858 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 ZNF197O14709 1029 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 MORC3Q14149 939 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 CAMK4Q16566 473 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 DDR2Q16832 855 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 IER5LQ5T953 404 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 TANGO2Q6ICL3 276 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 OR6B3Q8NGW1 331 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 FAM200AQ8TCP9 573 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 TAS1R2Q8TE23 839 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 NXPE3Q969Y0 559 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 MKNK1Q9BUB5 465 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 IL21Q9HBE4 155 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 GDE1Q9NZC3 331 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 ASB3Q9Y575 518 aa16.11■□□□□ 0.17
UBE3B-212ENST00000540230 PPP1R3GB7ZBB8 358 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 CETN3O15182 167 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 MICAL2O94851 1124 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 CLSTN1O94985 981 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 SRFP11831 508 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 KRT13P13646 458 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 HMGA1P17096 107 aaKnown RBP16.1■□□□□ 0.17
UBE3B-212ENST00000540230 CCNE1P24864 410 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 GABRR2P28476 465 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 GNL1P36915 607 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-212ENST00000540230 PIK3CAP42336 1068 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 MCCD1P59942 119 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-212ENST00000540230 CFAP221Q4G0U5 840 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 ZNF667Q5HYK9 610 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 FAM78AQ5JUQ0 283 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 KLHL10Q6JEL2 608 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 MTSS1LQ765P7 747 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 SPATA2LQ8IUW3 424 aaPredicted RBP16.1■□□□□ 0.17
UBE3B-212ENST00000540230 LEMD2Q8NC56 503 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 PCED1BQ96HM7 432 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 ASB16Q96NS5 453 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 TSG101Q99816 390 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 SNX25Q9H3E2 840 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 APOBEC3GQ9HC16 384 aaKnown RBP16.1■□□□□ 0.17
UBE3B-212ENST00000540230 GREB1Q4ZG55 1949 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 DENND4CQ5VZ89 1909 aa16.1■□□□□ 0.17
UBE3B-212ENST00000540230 ASS1P00966 412 aaKnown RBP16.09■□□□□ 0.17
UBE3B-212ENST00000540230 EPB41P11171 864 aaKnown RBP16.09■□□□□ 0.17
UBE3B-212ENST00000540230 VCPP55072 806 aaKnown RBP16.09■□□□□ 0.17
UBE3B-212ENST00000540230 GPC5P78333 572 aa16.09■□□□□ 0.17
UBE3B-212ENST00000540230 CYP4F8P98187 520 aa16.09■□□□□ 0.17
UBE3B-212ENST00000540230 VEPH1Q14D04 833 aa16.09■□□□□ 0.17
UBE3B-212ENST00000540230 MDH1BQ5I0G3 518 aa16.09■□□□□ 0.17
UBE3B-212ENST00000540230 ITIH5Q86UX2 942 aa16.09■□□□□ 0.17
UBE3B-212ENST00000540230 DUSP9Q99956 384 aaKnown RBP16.09■□□□□ 0.17
UBE3B-212ENST00000540230 ABCB6Q9NP58 842 aa16.09■□□□□ 0.17
UBE3B-212ENST00000540230 TMEM30AQ9NV96 361 aa16.09■□□□□ 0.17
UBE3B-212ENST00000540230 HMGXB4Q9UGU5 601 aa16.09■□□□□ 0.17
UBE3B-212ENST00000540230 KRBA1A5PL33 1030 aa16.09■□□□□ 0.17
UBE3B-212ENST00000540230 A8MXQ7 604 aa16.09■□□□□ 0.17
UBE3B-212ENST00000540230 PSMA7O14818 248 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms