RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SLC4A7Q9Y6M7 1214 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 MYH6P13533 1939 aa8.13□□□□□ -1.11
CCDC60-204ENST00000539847 COL11A1P12107 1806 aaPredicted RBP8.13□□□□□ -1.11
CCDC60-204ENST00000539847 SMIM22K7EJ46 135 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 TRAFD1O14545 582 aaPredicted RBP8.12□□□□□ -1.11
CCDC60-204ENST00000539847 TBX3O15119 743 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 RIPK2O43353 540 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 EDIL3O43854 480 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 HIP1RO75146 1068 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 UBOX5O94941 541 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 FGGP02679 453 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 SSBP05455 408 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCDC60-204ENST00000539847 PLA2G4BP0C869 781 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 ACRP10323 421 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 BMP3P12645 472 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 BMP1P13497 986 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 ATP2A2P16615 1042 aaKnown RBP8.12□□□□□ -1.11
CCDC60-204ENST00000539847 ITIH2P19823 946 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 CYP2C18P33260 490 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 MAN1A1P33908 653 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 RFC2P35250 354 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 RASSF2P50749 326 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 ALDH5A1P51649 535 aaPredicted RBP8.12□□□□□ -1.11
CCDC60-204ENST00000539847 ADCY7P51828 1080 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 GALCP54803 685 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 RNASE9P60153 205 aaKnown RBP8.12□□□□□ -1.11
CCDC60-204ENST00000539847 TRAF1Q13077 416 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 ITGA7Q13683 1181 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 SLC29A2Q14542 456 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 ASPRV1Q53RT3 343 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 HERC4Q5GLZ8 1057 aaPredicted RBP8.12□□□□□ -1.11
CCDC60-204ENST00000539847 ALG1LQ6GMV1 187 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 PPP1R21Q6ZMI0 780 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 DYMQ7RTS9 669 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 NOP9Q86U38 636 aaKnown RBP8.12□□□□□ -1.11
CCDC60-204ENST00000539847 TLK2Q86UE8 772 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 RELL1Q8IUW5 271 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 MFN1Q8IWA4 741 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 SLFN12Q8IYM2 578 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 RIBC1Q8N443 379 aaPredicted RBP8.12□□□□□ -1.11
CCDC60-204ENST00000539847 ENDOVQ8N8Q3 282 aaKnown RBP8.12□□□□□ -1.11
CCDC60-204ENST00000539847 PHOSPHO2Q8TCD6 241 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 MAIP1Q8WWC4 291 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 HPS3Q969F9 1004 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 FAM122AQ96E09 287 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 SPDL1Q96EA4 605 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 EEF2KMTQ96G04 330 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 CCDC28BQ9BUN5 200 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 AP5M1Q9H0R1 490 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 WNT8AQ9H1J5 351 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 PPCSQ9HAB8 311 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 VTA1Q9NP79 307 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 SIX2Q9NPC8 291 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 UBN1Q9NPG3 1134 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 GRHL1Q9NZI5 618 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 ZFATQ9P243 1243 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 KLHL14Q9P2G3 628 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 LGALS13Q9UHV8 139 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 MTUS1Q9ULD2 1270 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 PACSIN2Q9UNF0 486 aaPredicted RBP8.12□□□□□ -1.11
CCDC60-204ENST00000539847 COG5Q9UP83 839 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 USP20Q9Y2K6 914 aa8.12□□□□□ -1.11
CCDC60-204ENST00000539847 ASTN1O14525 1302 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 PNMA6FA0A0J9YX94 578 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 SPDYE3A6NKU9 549 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 GRXCR1A8MXD5 290 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 OPLAHO14841 1288 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 PMM2O15305 246 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 EIF3DO15371 548 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCDC60-204ENST00000539847 DIAPH2O60879 1101 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 RPSAP08865 295 aaKnown RBP8.11□□□□□ -1.11
CCDC60-204ENST00000539847 SNHG28P0DPA3 235 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 PECAM1P16284 738 aaPredicted RBP8.11□□□□□ -1.11
CCDC60-204ENST00000539847 GAP43P17677 238 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 GNAZP19086 355 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 CYP11B2P19099 503 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 CALB2P22676 271 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 BRD2P25440 801 aaKnown RBP8.11□□□□□ -1.11
CCDC60-204ENST00000539847 SOX5P35711 763 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 CCNHP51946 323 aaPredicted RBP8.11□□□□□ -1.11
CCDC60-204ENST00000539847 STAT2P52630 851 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 FOXC1Q12948 553 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 RASA2Q15283 850 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 AP1ARQ63HQ0 302 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 CXCL17Q6UXB2 119 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 ARHGEF18Q6ZSZ5 1173 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 SPATA21Q7Z572 469 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 EXOC3L1Q86VI1 746 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 EGFL6Q8IUX8 553 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 LMNTD2Q8IXW0 634 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 CPXCR1Q8N123 301 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 SLC35G2Q8TBE7 412 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 ZNF398Q8TD17 642 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 FBF1Q8TES7 1133 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 CTNNBL1Q8WYA6 563 aaPredicted RBP8.11□□□□□ -1.11
CCDC60-204ENST00000539847 THOC1Q96FV9 657 aaKnown RBP8.11□□□□□ -1.11
CCDC60-204ENST00000539847 CEP95Q96GE4 821 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 BORCS6Q96GS4 357 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 MYO19Q96H55 970 aa8.11□□□□□ -1.11
CCDC60-204ENST00000539847 NAF1Q96HR8 494 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms