RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 ITGA8P53708 1063 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 JAM2P57087 298 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 SCARF1Q14162 830 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 MOGQ16653 247 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 SIGIRRQ6IA17 410 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 ANKMY2Q8IV38 441 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 NMUR2Q9GZQ4 415 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 HIPK3Q9H422 1215 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 EPB41L4AQ9HCS5 686 aaPredicted RBP13.01□□□□□ -0.33
USP3-203ENST00000538686 CNGB3Q9NQW8 809 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 SEL1LQ9UBV2 794 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 ERGIC3Q9Y282 383 aa13.01□□□□□ -0.33
USP3-203ENST00000538686 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13□□□□□ -0.33
USP3-203ENST00000538686 KLRF2D3W0D1 207 aa13□□□□□ -0.33
USP3-203ENST00000538686 PLEKHA8P1O95397 391 aa13□□□□□ -0.33
USP3-203ENST00000538686 C6orf222P0C671 652 aaPredicted RBP13□□□□□ -0.33
USP3-203ENST00000538686 UBL4AP11441 157 aa13□□□□□ -0.33
USP3-203ENST00000538686 PON1P27169 355 aa13□□□□□ -0.33
USP3-203ENST00000538686 ARL4CP56559 192 aa13□□□□□ -0.33
USP3-203ENST00000538686 KCNH2Q12809 1159 aa13□□□□□ -0.33
USP3-203ENST00000538686 LRP8Q14114 963 aa13□□□□□ -0.33
USP3-203ENST00000538686 Q3C1V9 767 aa13□□□□□ -0.33
USP3-203ENST00000538686 FBXO31Q5XUX0 539 aaPredicted RBP13□□□□□ -0.33
USP3-203ENST00000538686 EGFLAMQ63HQ2 1017 aa13□□□□□ -0.33
USP3-203ENST00000538686 RNF111Q6ZNA4 994 aa13□□□□□ -0.33
USP3-203ENST00000538686 FASTKD5Q7L8L6 764 aaKnown RBP13□□□□□ -0.33
USP3-203ENST00000538686 GPR180Q86V85 440 aa13□□□□□ -0.33
USP3-203ENST00000538686 ZC3H3Q8IXZ2 948 aaKnown RBP13□□□□□ -0.33
USP3-203ENST00000538686 ZNF34Q8IZ26 560 aa13□□□□□ -0.33
USP3-203ENST00000538686 ESX1Q8N693 406 aa13□□□□□ -0.33
USP3-203ENST00000538686 TMCO5AQ8N6Q1 288 aa13□□□□□ -0.33
USP3-203ENST00000538686 TTC13Q8NBP0 860 aa13□□□□□ -0.33
USP3-203ENST00000538686 GSTCDQ8NEC7 633 aa13□□□□□ -0.33
USP3-203ENST00000538686 ADCY4Q8NFM4 1077 aa13□□□□□ -0.33
USP3-203ENST00000538686 LILRB4Q8NHJ6 448 aa13□□□□□ -0.33
USP3-203ENST00000538686 TRUB1Q8WWH5 349 aaKnown RBP13□□□□□ -0.33
USP3-203ENST00000538686 FERMT1Q9BQL6 677 aa13□□□□□ -0.33
USP3-203ENST00000538686 WWP1Q9H0M0 922 aa13□□□□□ -0.33
USP3-203ENST00000538686 FETUBQ9UGM5 382 aa13□□□□□ -0.33
USP3-203ENST00000538686 APPL1Q9UKG1 709 aa13□□□□□ -0.33
USP3-203ENST00000538686 ALG6Q9Y672 507 aa13□□□□□ -0.33
USP3-203ENST00000538686 NRXN3Q9Y4C0 1643 aa13□□□□□ -0.33
USP3-203ENST00000538686 CAPN8A6NHC0 703 aa13□□□□□ -0.33
USP3-203ENST00000538686 ERVV-2B6SEH9 535 aa13□□□□□ -0.33
USP3-203ENST00000538686 RGS13O14921 159 aa13□□□□□ -0.33
USP3-203ENST00000538686 TOM1O60784 492 aa13□□□□□ -0.33
USP3-203ENST00000538686 STAMBPO95630 424 aa13□□□□□ -0.33
USP3-203ENST00000538686 CHEK2O96017 543 aa13□□□□□ -0.33
USP3-203ENST00000538686 CSF1RP07333 972 aa13□□□□□ -0.33
USP3-203ENST00000538686 OR52Z1P0C646 297 aa13□□□□□ -0.33
USP3-203ENST00000538686 MYL2P10916 166 aa13□□□□□ -0.33
USP3-203ENST00000538686 RAG1P15918 1043 aa13□□□□□ -0.33
USP3-203ENST00000538686 ADORA1P30542 326 aa13□□□□□ -0.33
USP3-203ENST00000538686 CIITAP33076 1130 aa13□□□□□ -0.33
USP3-203ENST00000538686 STAT1P42224 750 aa13□□□□□ -0.33
USP3-203ENST00000538686 CPA2P48052 419 aa13□□□□□ -0.33
USP3-203ENST00000538686 KRT76Q01546 638 aa13□□□□□ -0.33
USP3-203ENST00000538686 OVGP1Q12889 678 aa13□□□□□ -0.33
USP3-203ENST00000538686 ORC2Q13416 577 aaPredicted RBP13□□□□□ -0.33
USP3-203ENST00000538686 ATP1A4Q13733 1029 aa13□□□□□ -0.33
USP3-203ENST00000538686 CCNIQ14094 377 aa13□□□□□ -0.33
USP3-203ENST00000538686 SLC15A2Q16348 729 aa13□□□□□ -0.33
USP3-203ENST00000538686 RNF207Q6ZRF8 634 aa13□□□□□ -0.33
USP3-203ENST00000538686 C14orf80Q86SX3 495 aa13□□□□□ -0.33
USP3-203ENST00000538686 NLRP10Q86W26 655 aa13□□□□□ -0.33
USP3-203ENST00000538686 GOLM1Q8NBJ4 401 aa13□□□□□ -0.33
USP3-203ENST00000538686 SUN5Q8TC36 379 aa13□□□□□ -0.33
USP3-203ENST00000538686 SH3RF3Q8TEJ3 882 aaPredicted RBP13□□□□□ -0.33
USP3-203ENST00000538686 HPS3Q969F9 1004 aa13□□□□□ -0.33
USP3-203ENST00000538686 CLPTM1LQ96KA5 538 aa13□□□□□ -0.33
USP3-203ENST00000538686 CNBD2Q96M20 576 aa13□□□□□ -0.33
USP3-203ENST00000538686 ARMC7Q9H6L4 198 aa13□□□□□ -0.33
USP3-203ENST00000538686 PSMC3IPQ9P2W1 217 aaPredicted RBP13□□□□□ -0.33
USP3-203ENST00000538686 SEPT3Q9UH03 358 aa13□□□□□ -0.33
USP3-203ENST00000538686 PSMD13Q9UNM6 376 aa13□□□□□ -0.33
USP3-203ENST00000538686 TCRBV5S4A2TA0A5A2 114 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 PRAMEF22A3QJZ6 481 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 ARHGAP42A6NI28 874 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 FGFR1P11362 822 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 CCDC130P13994 396 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 TTKP33981 857 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 PSMD6Q15008 389 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 OASLQ15646 514 aaKnown RBP12.99□□□□□ -0.33
USP3-203ENST00000538686 CLEC16AQ2KHT3 1053 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 TRIM16LQ309B1 348 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 RABGAP1LQ5R372 815 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 IFIT1BQ5T764 474 aaKnown RBP12.99□□□□□ -0.33
USP3-203ENST00000538686 IYDQ6PHW0 289 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 ANKS1BQ7Z6G8 1248 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 GRAMD2AQ8IUY3 354 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 C4orf33Q8N1A6 199 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 PQLC1Q8N2U9 271 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 SLC25A41Q8N5S1 370 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 ZNF420Q8TAQ5 688 aaPredicted RBP12.99□□□□□ -0.33
USP3-203ENST00000538686 HM13Q8TCT9 377 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 SLC30A1Q9Y6M5 507 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 A0A1B0GUL6 1792 aa12.99□□□□□ -0.33
USP3-203ENST00000538686 LOC105371267A0A1B0GV96 52 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 CFAP99D6REC4 459 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 KLF11O14901 512 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms