RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 DCAF15Q66K64 600 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 TMEM35BQ8NCS4 154 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 DENND1AQ8TEH3 1009 aa12.6□□□□□ -0.39
CPNE8-203ENST00000538596 MAK16Q9BXY0 300 aaKnown RBP12.6□□□□□ -0.39
CPNE8-203ENST00000538596 TCRBV7S3A2A0A539 114 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 C3orf70A6NLC5 250 aaPredicted RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 STAT5BP51692 787 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 CDH8P55286 799 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 OTUD4Q01804 1114 aaKnown RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 TAF5Q15542 800 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 TARBP2Q15633 366 aaKnown RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 LY6KQ17RY6 165 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 FNBP1LQ5T0N5 605 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 ACTL9Q8TC94 416 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 MAGEC3Q8TD91 643 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 WDR83Q9BRX9 315 aaKnown RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 NIF3L1Q9GZT8 377 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 MYLK2Q9H1R3 596 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 PCSK1NQ9UHG2 260 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 ZNF112Q9UJU3 913 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 PHTF1Q9UMS5 762 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 ACTL7BQ9Y614 415 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 SIP14410 1827 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 IGKV6D-21A0A0A0MT36 114 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 EZRP15311 586 aaKnown RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 CD19P15391 556 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 CA4P22748 312 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 PSMA2P25787 234 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 SLC8A1P32418 973 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 ABCD1P33897 745 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 TCF7P36402 384 aaPredicted RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 TFDP1Q14186 410 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 NEDD9Q14511 834 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 CCDC142Q17RM4 750 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 DRICH1Q6PGQ1 229 aaPredicted RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 WDR49Q8IV35 697 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 TMEM192Q8IY95 271 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 RNF149Q8NC42 400 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 MYCBPQ99417 103 aaPredicted RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 TMEM134Q9H6X4 195 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 AGTPBP1Q9UPW5 1226 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 CLUHO75153 1309 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 WDR91A4D1P6 747 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 GOLGA8RI6L899 631 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 ATP2A1O14983 1001 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 ALOX15BO15296 676 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 B4GALT5O43286 388 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 CST8O60676 142 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 STAM2O75886 525 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 ASPAP45381 313 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 CTCFP49711 727 aaPredicted RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 MCL1Q07820 350 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 TRPC3Q13507 836 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 MORF4L2Q15014 288 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 TREML2Q5T2D2 321 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 ASRGL1Q7L266 308 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 KIRREL3Q8IZU9 778 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 TRAPPC12Q8WVT3 735 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 C12orf42Q96LP6 360 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 TMEM237Q96Q45 408 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 SMC6Q96SB8 1091 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 KLF6Q99612 283 aaPredicted RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 ACO2Q99798 780 aaKnown RBP12.59□□□□□ -0.39
CPNE8-203ENST00000538596 ARHGEF3Q9NR81 526 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 KCNG1Q9UIX4 513 aa12.59□□□□□ -0.39
CPNE8-203ENST00000538596 LRCH4O75427 683 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 TOM1L1O75674 476 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 KRT19P08727 400 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 ICAM3P32942 547 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 IRX3P78415 501 aaPredicted RBP12.58□□□□□ -0.4
CPNE8-203ENST00000538596 SLC25A11Q02978 314 aaKnown RBP12.58□□□□□ -0.4
CPNE8-203ENST00000538596 MYO1EQ12965 1108 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 DUOXA2Q1HG44 320 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 ZNF699Q32M78 642 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 LRRC38Q5VT99 294 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 RNF43Q68DV7 783 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 GIMAP7Q8NHV1 300 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 SLC35B2Q8TB61 432 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 N4BP2L2Q92802 583 aaPredicted RBP12.58□□□□□ -0.4
CPNE8-203ENST00000538596 ERP27Q96DN0 273 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 CXorf56Q9H5V9 222 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 ETNK1Q9HBU6 452 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 CHKBQ9Y259 395 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 DRG1Q9Y295 367 aaKnown RBP12.58□□□□□ -0.4
CPNE8-203ENST00000538596 MGAMO43451 1857 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 LSM8O95777 96 aaKnown RBP12.58□□□□□ -0.4
CPNE8-203ENST00000538596 ITGAVP06756 1048 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 HOXC6P09630 235 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 KRT4P19013 534 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 LAMTOR4Q0VGL1 99 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 PIGHQ14442 188 aaPredicted RBP12.58□□□□□ -0.4
CPNE8-203ENST00000538596 HIF1AQ16665 826 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
CPNE8-203ENST00000538596 CENPUQ71F23 418 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 RHPN2Q8IUC4 686 aa12.58□□□□□ -0.4
CPNE8-203ENST00000538596 RIBC1Q8N443 379 aaPredicted RBP12.58□□□□□ -0.4
CPNE8-203ENST00000538596 GBP7Q8N8V2 638 aaPredicted RBP12.58□□□□□ -0.4
CPNE8-203ENST00000538596 CCHCR1Q8TD31 782 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms