RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CILPO75339 1184 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 PNMA6AP0CW24 399 aaPredicted RBP13.98□□□□□ -0.17
CHFR-216ENST00000538235 CCDC130P13994 396 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 ZNF165P49910 485 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 COPB1P53618 953 aaKnown RBP13.98□□□□□ -0.17
CHFR-216ENST00000538235 SMAD4Q13485 552 aaKnown RBP13.98□□□□□ -0.17
CHFR-216ENST00000538235 CUL2Q13617 745 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 TPD52L1Q16890 204 aaPredicted RBP13.98□□□□□ -0.17
CHFR-216ENST00000538235 SKOR2Q2VWA4 1001 aaPredicted RBP13.98□□□□□ -0.17
CHFR-216ENST00000538235 VWA3BQ502W6 1294 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 MDH1BQ5I0G3 518 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 TRIM65Q6PJ69 517 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 RRAGAQ7L523 313 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 PPFIBP1Q86W92 1011 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 TCEAL8Q8IYN2 117 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 EHBP1Q8NDI1 1231 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 OR6B3Q8NGW1 331 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 PCED1BQ96HM7 432 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 ACBD6Q9BR61 282 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 LRRC3Q9BY71 257 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 B3GNT5Q9BYG0 378 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 ZNF518BQ9C0D4 1074 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 VPS16Q9H269 839 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 NDST4Q9H3R1 872 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 SFXN1Q9H9B4 322 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 ZNF334Q9HCZ1 680 aaPredicted RBP13.98□□□□□ -0.17
CHFR-216ENST00000538235 LIMA1Q9UHB6 759 aaKnown RBP13.98□□□□□ -0.17
CHFR-216ENST00000538235 COG5Q9UP83 839 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 COL4A3Q01955 1670 aa13.98□□□□□ -0.17
CHFR-216ENST00000538235 MYO10Q9HD67 2058 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 CCDC195A0A1B0GUA6 201 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 BECN2A8MW95 431 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 STX10O60499 249 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 BMP1P13497 986 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 PRKCSHP14314 528 aaPredicted RBP13.97□□□□□ -0.17
CHFR-216ENST00000538235 CYP2F1P24903 491 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 EEF1GP26641 437 aaKnown RBP13.97□□□□□ -0.17
CHFR-216ENST00000538235 PON1P27169 355 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 CCR2P41597 374 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 RAD23BP54727 409 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 SLC5A9Q2M3M2 681 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 TPGS2Q68CL5 300 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 PTCRAQ6ISU1 281 aaPredicted RBP13.97□□□□□ -0.17
CHFR-216ENST00000538235 GPR149Q86SP6 731 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 ACOT1Q86TX2 421 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 METTL23Q86XA0 190 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHFR-216ENST00000538235 HS6ST3Q8IZP7 471 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 C12orf29Q8N999 325 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 SLC4A11Q8NBS3 891 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 ZMIZ2Q8NF64 920 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 CMASQ8NFW8 434 aaPredicted RBP13.97□□□□□ -0.17
CHFR-216ENST00000538235 SPATA18Q8TC71 538 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 GPR152Q8TDT2 470 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 GPR88Q9GZN0 384 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 CYP4F11Q9HBI6 524 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 CD320Q9NPF0 282 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 ACP6Q9NPH0 428 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 CISHQ9NSE2 258 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 FAM49BQ9NUQ9 324 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 DZANK1Q9NVP4 752 aa13.97□□□□□ -0.17
CHFR-216ENST00000538235 ABI2Q9NYB9 513 aaPredicted RBP13.97□□□□□ -0.17
CHFR-216ENST00000538235 A8MXQ7 604 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 P4HA2O15460 535 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 TEX33O43247 280 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 MOSPD3O75425 235 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 BEST1O76090 585 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 NOL4O94818 638 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 CLSTN1O94985 981 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 FGFR1OPO95684 399 aaKnown RBP13.96□□□□□ -0.17
CHFR-216ENST00000538235 C1RP00736 705 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 HAPLN1P10915 354 aaPredicted RBP13.96□□□□□ -0.17
CHFR-216ENST00000538235 PTPN1P18031 435 aaKnown RBP13.96□□□□□ -0.17
CHFR-216ENST00000538235 GNL1P36915 607 aaPredicted RBP13.96□□□□□ -0.17
CHFR-216ENST00000538235 LHX1P48742 406 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 TWF1Q12792 350 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 MTMR3Q13615 1198 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.17
CHFR-216ENST00000538235 ZNF394Q53GI3 561 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 LRSAM1Q6UWE0 723 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 TMC8Q8IU68 726 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 FUKQ8N0W3 1084 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 B3GALNT2Q8NCR0 500 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 PRKD2Q9BZL6 878 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 GANQ9H2C0 597 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 ADAM7Q9H2U9 754 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 PLEKHA4Q9H4M7 779 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 DNMT3BQ9UBC3 853 aaKnown RBP13.96□□□□□ -0.17
CHFR-216ENST00000538235 CDH9Q9ULB4 789 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 SIK3Q9Y2K2 1263 aa13.96□□□□□ -0.17
CHFR-216ENST00000538235 MUC3AQ02505 3323 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 NCANO14594 1321 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 GTPBP10A4D1E9 387 aaKnown RBP13.95□□□□□ -0.18
CHFR-216ENST00000538235 NCK2O43639 380 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 TADA3O75528 432 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 SP100P23497 879 aaPredicted RBP13.95□□□□□ -0.18
CHFR-216ENST00000538235 HOXA9P31269 272 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 ZNF132P52740 706 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 ZNF445P59923 1031 aa13.95□□□□□ -0.18
CHFR-216ENST00000538235 SMAD2Q15796 467 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms