RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 LAG3P18627 525 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 ETFBP38117 255 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 TKTL1P51854 596 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 SNX1Q13596 522 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 DHX35Q9H5Z1 703 aaKnown RBP7.66□□□□□ -1.18
MSH6-209ENST00000538136 BRD9Q9H8M2 597 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 OLFML3Q9NRN5 406 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 GKN1Q9NS71 199 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 HMGXB4Q9UGU5 601 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 TSR3Q9UJK0 312 aaKnown RBP7.66□□□□□ -1.18
MSH6-209ENST00000538136 CPSF3Q9UKF6 684 aaKnown RBP7.66□□□□□ -1.18
MSH6-209ENST00000538136 TSPAN16Q9UKR8 245 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 LRRD1A4D1F6 860 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 IL18RAPO95256 599 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 FTLP02792 175 aaPredicted RBP7.66□□□□□ -1.18
MSH6-209ENST00000538136 SARSP49591 514 aaKnown RBP7.66□□□□□ -1.18
MSH6-209ENST00000538136 ZNF75DP51815 510 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 GTF2BQ00403 316 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 C2orf27AQ580R0 203 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 TCEAL5Q5H9L2 206 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 SND1Q7KZF4 910 aaKnown RBP eCLIP7.66□□□□□ -1.186e-6■□□□□ 9.2
MSH6-209ENST00000538136 SEMA4DQ92854 862 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 SYNDIG1Q9H7V2 258 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 TRPM5Q9NZQ8 1165 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 SFMBT1Q9UHJ3 866 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 TBX21Q9UL17 535 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 PCDHB5Q9Y5E4 795 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 COMMD10Q9Y6G5 202 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 SBF1O95248 1867 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 ARHGEF37A1IGU5 675 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 ZBTB42B2RXF5 422 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 ADAM12O43184 909 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 PSMA2P25787 234 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 CCDC173Q0VFZ6 552 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 GRIK3Q13003 919 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 RAB30Q15771 203 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 TTI2Q6NXR4 508 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 ALKBH5Q6P6C2 394 aaKnown RBP7.66□□□□□ -1.18
MSH6-209ENST00000538136 CHSY1Q86X52 802 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 ARL14EPQ8N8R7 260 aaPredicted RBP7.66□□□□□ -1.18
MSH6-209ENST00000538136 TMEM35BQ8NCS4 154 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 MYLPFQ96A32 169 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 ADAMTS10Q9H324 1103 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 FZD8Q9H461 694 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 TMEM8AQ9HCN3 771 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 ABCF3Q9NUQ8 709 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 CNOT8Q9UFF9 292 aaKnown RBP7.66□□□□□ -1.18
MSH6-209ENST00000538136 ANAPC7Q9UJX3 599 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 STRIP2Q9ULQ0 834 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 L1RE1Q9UN81 338 aa7.66□□□□□ -1.18
MSH6-209ENST00000538136 PAPPA2Q9BXP8 1791 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 TYW5A2RUC4 315 aaKnown RBP7.65□□□□□ -1.18
MSH6-209ENST00000538136 TBC1D3BA6NDS4 549 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 PITPNM1O00562 1244 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 TEX28O15482 410 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 MSI1O43347 362 aaKnown RBP7.65□□□□□ -1.18
MSH6-209ENST00000538136 CNPP09543 421 aaKnown RBP7.65□□□□□ -1.18
MSH6-209ENST00000538136 PDGFRAP16234 1089 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 GARTP22102 1010 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 FAM193AP78312 1265 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 EHHADHQ08426 723 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 CUL2Q13617 745 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 GPR158Q5T848 1215 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 C9orf57Q5W0N0 161 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 FAM124AQ86V42 546 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 CCDC25Q86WR0 208 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 SMG8Q8ND04 991 aaKnown RBP7.65□□□□□ -1.18
MSH6-209ENST00000538136 MAN1C1Q9NR34 630 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 BCCIPQ9P287 314 aaKnown RBP eCLIP7.65□□□□□ -1.18
MSH6-209ENST00000538136 INVSQ9Y283 1065 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 GIT1Q9Y2X7 761 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 C5orf42Q9H799 3197 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 SLC38A8A6NNN8 435 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 ATG7O95352 703 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 MMEP08473 750 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 XPAP23025 273 aaPredicted RBP7.65□□□□□ -1.18
MSH6-209ENST00000538136 ACTN2P35609 894 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 PPM1AP35813 382 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 ZNF211Q13398 564 aaPredicted RBP7.65□□□□□ -1.18
MSH6-209ENST00000538136 RNF219Q5W0B1 726 aaPredicted RBP7.65□□□□□ -1.18
MSH6-209ENST00000538136 SLC39A4Q6P5W5 647 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 CCDC149Q6ZUS6 474 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 TAS1R3Q7RTX0 852 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 DDX27Q96GQ7 796 aaKnown RBP7.65□□□□□ -1.18
MSH6-209ENST00000538136 DUSP9Q99956 384 aaKnown RBP7.65□□□□□ -1.18
MSH6-209ENST00000538136 TIPINQ9BVW5 301 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 ERVK-5Q9HDB9 667 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 ASAH2Q9NR71 780 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 TJP2Q9UDY2 1190 aa7.65□□□□□ -1.18
MSH6-209ENST00000538136 NCOR2Q9Y618 2525 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 NOTCH2Q04721 2471 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 KIF5CO60282 957 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 MYL1P05976 194 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 CFHP08603 1231 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 H2AFZP0C0S5 128 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 PTPN1P18031 435 aaKnown RBP7.65□□□□□ -1.19
MSH6-209ENST00000538136 EEF1GP26641 437 aaKnown RBP7.65□□□□□ -1.19
MSH6-209ENST00000538136 BMPR1AP36894 532 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 VIPR2P41587 438 aa7.65□□□□□ -1.19
MSH6-209ENST00000538136 TAF10Q12962 218 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms