RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 ZACNQ401N2 412 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 SLC39A12Q504Y0 691 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 CAVIN1Q6NZI2 390 aaKnown RBP19.25■□□□□ 0.67
CCDC61-201ENST00000536603 SV2AQ7L0J3 742 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 DPH6Q7L8W6 267 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 OSTM1Q86WC4 334 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 C1orf210Q8IVY1 113 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 ZC3H3Q8IXZ2 948 aaKnown RBP19.25■□□□□ 0.67
CCDC61-201ENST00000536603 ADGRF2Q8IZF7 708 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 SYAP1Q96A49 352 aaPredicted RBP19.25■□□□□ 0.67
CCDC61-201ENST00000536603 ZCWPW1Q9H0M4 648 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 XYLT2Q9H1B5 865 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 MMRN2Q9H8L6 949 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 SLC2A4RGQ9NR83 387 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 DDX43Q9NXZ2 648 aaKnown RBP19.25■□□□□ 0.67
CCDC61-201ENST00000536603 CTNND2Q9UQB3 1225 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 TSC2P49815 1807 aa19.25■□□□□ 0.67
CCDC61-201ENST00000536603 XYLBO75191 536 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 CLSTN1O94985 981 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 VNN2O95498 520 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 LRG1P02750 347 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 SP9P0CG40 484 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 LHX1P48742 406 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 STX17P56962 302 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 ENPEPQ07075 957 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 PPP3CAQ08209 521 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 DUSP4Q13115 394 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 LIMS2Q7Z4I7 341 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 LRRTM3Q86VH5 581 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 ATAD1Q8NBU5 361 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 PJA1Q8NG27 643 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 DUSP9Q99956 384 aaKnown RBP19.24■□□□□ 0.67
CCDC61-201ENST00000536603 FOXQ1Q9C009 403 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 NXF1Q9UBU9 619 aaKnown RBP19.24■□□□□ 0.67
CCDC61-201ENST00000536603 CDH7Q9ULB5 785 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 SLC27A5Q9Y2P5 690 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 INSL5Q9Y5Q6 135 aa19.24■□□□□ 0.67
CCDC61-201ENST00000536603 RIF1Q5UIP0 2472 aaKnown RBP19.24■□□□□ 0.67
CCDC61-201ENST00000536603 BICDL2A1A5D9 508 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 MTMR11A4FU01 709 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 GABRDO14764 452 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 SLC16A3O15427 465 aaKnown RBP19.23■□□□□ 0.67
CCDC61-201ENST00000536603 STAU1O95793 577 aaKnown RBP19.23■□□□□ 0.67
CCDC61-201ENST00000536603 ACAT1P24752 427 aaKnown RBP19.23■□□□□ 0.67
CCDC61-201ENST00000536603 MCCD1P59942 119 aaPredicted RBP19.23■□□□□ 0.67
CCDC61-201ENST00000536603 TNNC1P63316 161 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 GPC5P78333 572 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 NTHL1P78549 312 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 MYL7Q01449 175 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 TSPY1Q01534 308 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 PAK1Q13153 545 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 ZNF699Q32M78 642 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 CCDC183Q5T5S1 534 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 TTI2Q6NXR4 508 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 PARM1Q6UWI2 310 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 MTSS1LQ765P7 747 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 SPATA18Q8TC71 538 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 FGF14Q92915 247 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 ELMO3Q96BJ8 720 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 ACBD6Q9BR61 282 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 RPP25Q9BUL9 199 aaKnown RBP19.23■□□□□ 0.67
CCDC61-201ENST00000536603 CRISPLD1Q9H336 500 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 MIA3Q5JRA6 1907 aa19.23■□□□□ 0.67
CCDC61-201ENST00000536603 DMDP11532 3685 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 HCRTO43612 131 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 HLA-DRAP01903 254 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 LMO2P25791 158 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 TWF1Q12792 350 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 SGSM1Q2NKQ1 1148 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 SKOR2Q2VWA4 1001 aaPredicted RBP19.22■□□□□ 0.67
CCDC61-201ENST00000536603 ZNF667Q5HYK9 610 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 RBM43Q6ZSC3 357 aaKnown RBP19.22■□□□□ 0.67
CCDC61-201ENST00000536603 DGLUCYQ7Z3D6 616 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 FILIP1Q7Z7B0 1213 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 DCP1BQ8IZD4 617 aaKnown RBP19.22■□□□□ 0.67
CCDC61-201ENST00000536603 KBTBD7Q8WVZ9 684 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 RMDN1Q96DB5 314 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 MRPL45Q9BRJ2 306 aaKnown RBP19.22■□□□□ 0.67
CCDC61-201ENST00000536603 VRTNQ9H8Y1 702 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 HCFC1R1Q9NWW0 138 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 DLGAP2Q9P1A6 1054 aa19.22■□□□□ 0.67
CCDC61-201ENST00000536603 DNMT3BQ9UBC3 853 aaKnown RBP19.22■□□□□ 0.67
CCDC61-201ENST00000536603 LRRN2O75325 713 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 TACC1O75410 805 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 POU2F2P09086 479 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 WARSP23381 471 aaKnown RBP19.21■□□□□ 0.67
CCDC61-201ENST00000536603 GTF2H1P32780 548 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 PIK3CAP42336 1068 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 STARD6P59095 220 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 SMARCB1Q12824 385 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 UBXN2BQ14CS0 331 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 TCERG1LQ5VWI1 586 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 FOXR2Q6PJQ5 311 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 TAS1R2Q8TE23 839 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 RUBCNQ92622 972 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 FGF13Q92913 245 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 DOCK6Q96HP0 2047 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 CEP63Q96MT8 703 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 BCO2Q9BYV7 579 aa19.21■□□□□ 0.67
CCDC61-201ENST00000536603 SNX25Q9H3E2 840 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms