RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 AKAP3O75969 853 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ZNF806P0C7X5 589 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 IFNAR2P48551 515 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 LIMK1P53667 647 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 NLRP12P59046 1061 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 RPL10AP62906 217 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 MYL7Q01449 175 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PSMD2Q13200 908 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 POSTNQ15063 836 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PDGFRLQ15198 375 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ELF2Q15723 593 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CCDC6Q16204 474 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 FBXO43Q4G163 708 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CAMKK1Q8N5S9 505 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 NOC3LQ8WTT2 800 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ACDQ96AP0 544 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 HVCN1Q96D96 273 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 P2RY13Q9BPV8 354 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PI4K2AQ9BTU6 479 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 SMC3Q9UQE7 1217 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 PCDHGA5Q9Y5G8 931 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 GREB1Q4ZG55 1949 aa13.97□□□□□ -0.17
TNFRSF1A-207ENST00000535958 SOBPA7XYQ1 873 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ANKRD63C9JTQ0 380 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TRDMT1O14717 391 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CKMP06732 381 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TXLNAP40222 546 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 MPLP40238 635 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TFAMQ00059 246 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 POU5F1Q01860 360 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 ZC2HC1CQ53FD0 456 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TXNDC8Q6A555 127 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 FSTL4Q6MZW2 842 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 KBTBD6Q86V97 674 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 FSIP1Q8NA03 581 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CCDC26Q8TAB7 109 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CACTINQ8WUQ7 758 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 USP13Q92995 863 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 HHIPQ96QV1 700 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 FAM83CQ9BQN1 747 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CCSER1Q9C0I3 900 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 HPS4Q9NQG7 708 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CCDC39Q9UFE4 941 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 CCL26Q9Y258 94 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 SCN1AP35498 2009 aa13.96□□□□□ -0.17
TNFRSF1A-207ENST00000535958 TRAV19A0A0A6YYK7 116 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TISP43B9A030 160 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 RHOBTB1O94844 696 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 EGFP01133 1207 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 USP17L7P0C7H9 530 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ARSAP15289 507 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 POLR2BP30876 1174 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 FAM160A1Q05DH4 1040 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 NR1H3Q13133 447 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ZNF268Q14587 947 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 MTF1Q14872 753 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 STPG1Q5TH74 334 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 RNF43Q68DV7 783 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 PKN3Q6P5Z2 889 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 BRAPQ7Z569 592 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 LRRTM3Q86VH5 581 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 MON1AQ86VX9 555 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SPATA2LQ8IUW3 424 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 RPLP0P6Q8NHW5 317 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ATP2A3Q93084 1043 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ST6GALNAC4Q9H4F1 302 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 MRPL44Q9H9J2 332 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 VPS45Q9NRW7 570 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 BLOC1S4Q9NUP1 217 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 DUS2Q9NX74 493 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 DDX43Q9NXZ2 648 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SPAG17Q6Q759 2223 aa13.95□□□□□ -0.18
TNFRSF1A-207ENST00000535958 APBB3O95704 486 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 LDHAP00338 332 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 F11P03951 625 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ITGB3P05106 788 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 KRT19P08727 400 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TMEM191BP0C7N4 346 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 GBP1P32455 592 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 RAP1GAPP47736 663 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 GPR15P49685 360 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 PDE6CP51160 858 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 KCNB1Q14721 858 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SDHAF4Q5VUM1 108 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 LARP1BQ659C4 914 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 DYMQ7RTS9 669 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SFR1Q86XK3 245 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SCN4BQ8IWT1 228 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 EFCAB13Q8IY85 973 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 SYCP3Q8IZU3 236 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TMEM86AQ8N2M4 240 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 STKLD1Q8NE28 680 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 LEO1Q8WVC0 666 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 OSCP1Q8WVF1 389 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 CD101Q93033 1021 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TMX3Q96JJ7 454 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ACCSQ96QU6 501 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 KIF2CQ99661 725 aa13.94□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ACBD6Q9BR61 282 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms