RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 TNNC1P63316 161 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 DSC1Q08554 894 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 CUL2Q13617 745 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 RAPGEF1Q13905 1077 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 DRAP1Q14919 205 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-205ENST00000535900 PTPN14Q15678 1187 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 NAB2Q15742 525 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 GLRA4Q5JXX5 417 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 KIAA1841Q6NSI8 718 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 DCLRE1AQ6PJP8 1040 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 CYP26C1Q6V0L0 522 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 TMTC1Q8IUR5 882 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 C12orf76Q8N812 135 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-205ENST00000535900 KREMEN2Q8NCW0 462 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 PRSS33Q8NF86 280 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 CPLX3Q8WVH0 158 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 C18orf25Q96B23 403 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-205ENST00000535900 BAG1Q99933 345 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-205ENST00000535900 EMILIN2Q9BXX0 1053 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 BCO2Q9BYV7 579 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 SFXN1Q9H9B4 322 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 STK39Q9UEW8 545 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 SORCS3Q9UPU3 1222 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 CNTN6Q9UQ52 1028 aa11.52□□□□□ -0.57
UBE3B-205ENST00000535900 PRG3Q9Y2Y8 225 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-205ENST00000535900 TDRD15B5MCY1 1934 aaKnown RBP11.52□□□□□ -0.57
UBE3B-205ENST00000535900 SSU72P8A0A1W2PR75 194 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 LRRC53A6NM62 1247 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 B4GALT3O60512 393 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 GFPT2O94808 682 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 POMCP01189 267 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 URODP06132 367 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 PRKCIP41743 596 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 ADKP55263 362 aaKnown RBP11.51□□□□□ -0.57
UBE3B-205ENST00000535900 LRMPQ12912 555 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 UPP1Q16831 310 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 WDR72Q3MJ13 1102 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 TMC5Q6UXY8 1006 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 VPS36Q86VN1 386 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 ZNF280BQ86YH2 543 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 FAM71AQ8IYT1 594 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 CCDC170Q8IYT3 715 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 TOP6BLQ8N6T0 577 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 ASIC4Q96FT7 647 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 TMEM175Q9BSA9 504 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 PI4K2AQ9BTU6 479 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 NLRC4Q9NPP4 1024 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 SPTLC3Q9NUV7 552 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 TUBGCP4Q9UGJ1 667 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 FAN1Q9Y2M0 1017 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 NUB1Q9Y5A7 615 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 IRAK3Q9Y616 596 aa11.51□□□□□ -0.57
UBE3B-205ENST00000535900 SCN1AP35498 2009 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 KPNA7A9QM74 516 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 PODXLO00592 558 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 C2CD2LO14523 706 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 TRAPPC3O43617 180 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 TACC1O75410 805 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 DDHD2O94830 711 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 SERPING1P05155 500 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 KLRC2P26717 231 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 OR1G1P47890 313 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 AARSP49588 968 aaKnown RBP eCLIP11.5□□□□□ -0.57
UBE3B-205ENST00000535900 VCPP55072 806 aaKnown RBP11.5□□□□□ -0.57
UBE3B-205ENST00000535900 LILRA4P59901 499 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 SOX4Q06945 474 aaPredicted RBP11.5□□□□□ -0.57
UBE3B-205ENST00000535900 ASIC2Q16515 512 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 ATAT1Q5SQI0 421 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 ELMSAN1Q6PJG2 1045 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 CCDC149Q6ZUS6 474 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 LIMS2Q7Z4I7 341 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 TMEM139Q8IV31 216 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 ARHGEF19Q8IW93 802 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 COLGALT2Q8IYK4 626 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 UBALD2Q8IYN6 164 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 TMEM86AQ8N2M4 240 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 TATDN2Q93075 761 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 KREMEN1Q96MU8 473 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 HERC2P3Q9BVR0 1158 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 VN1R3Q9BXE9 311 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 APOBEC3GQ9HC16 384 aaKnown RBP11.5□□□□□ -0.57
UBE3B-205ENST00000535900 MRPL17Q9NRX2 175 aaKnown RBP11.5□□□□□ -0.57
UBE3B-205ENST00000535900 MIOSQ9NXC5 875 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 DSEQ9UL01 958 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 KIAA1257Q9ULG3 409 aa11.5□□□□□ -0.57
UBE3B-205ENST00000535900 PLXNA3P51805 1871 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 GOLGA6L9A6NEM1 432 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 RNF225M0QZC1 329 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-205ENST00000535900 FOXN3O00409 490 aaPredicted RBP11.49□□□□□ -0.57
UBE3B-205ENST00000535900 NRP1O14786 923 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 HUS1O60921 280 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 CLSTN1O94985 981 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 SOD2P04179 222 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 TUBB4AP04350 444 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 PAEPP09466 180 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 ASPAP45381 313 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 GLUD2P49448 558 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 AFF1P51825 1210 aaKnown RBP11.49□□□□□ -0.57
UBE3B-205ENST00000535900 PTK2Q05397 1052 aa11.49□□□□□ -0.57
UBE3B-205ENST00000535900 KLHL30Q0D2K2 578 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms