RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 TSPAN18Q96SJ8 248 aa9.64□□□□□ -0.87
CCDC90B-219ENST00000534753 CORO1BQ9BR76 489 aa9.64□□□□□ -0.87
CCDC90B-219ENST00000534753 SAP130Q9H0E3 1048 aa9.64□□□□□ -0.87
CCDC90B-219ENST00000534753 MAGEF1Q9HAY2 307 aa9.64□□□□□ -0.87
CCDC90B-219ENST00000534753 KCNK12Q9HB15 430 aa9.64□□□□□ -0.87
CCDC90B-219ENST00000534753 EXOC1Q9NV70 894 aa9.64□□□□□ -0.87
CCDC90B-219ENST00000534753 HSPBP1Q9NZL4 362 aa9.64□□□□□ -0.87
CCDC90B-219ENST00000534753 FBXL21Q9UKT6 434 aa9.64□□□□□ -0.87
CCDC90B-219ENST00000534753 AGAP1Q9UPQ3 857 aa9.64□□□□□ -0.87
CCDC90B-219ENST00000534753 DERAQ9Y315 318 aa9.64□□□□□ -0.87
CCDC90B-219ENST00000534753 HRH3Q9Y5N1 445 aa9.64□□□□□ -0.87
CCDC90B-219ENST00000534753 GOLGA6L4A6NEF3 574 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 ZNF233A6NK53 670 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 M0QZQ0 153 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 PIRO00625 290 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 NARSO43776 548 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 ICMTO60725 284 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 ABLIM3O94929 683 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 C1RP00736 705 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 PDGFBP01127 241 aaPredicted RBP9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 TMEM191BP0C7N4 346 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 DLATP10515 647 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 MYL4P12829 197 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 PTPN2P17706 415 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 HOXD13P35453 343 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 TAF6P49848 677 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 TWF1Q12792 350 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 MRPL58Q14197 206 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 UVSSAQ2YD98 709 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 SV2CQ496J9 727 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 SLC8B1Q6J4K2 584 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 CYP26C1Q6V0L0 522 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 HS2ST1Q7LGA3 356 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 CBWD2Q8IUF1 395 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 BRSK2Q8IWQ3 736 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 SUGP1Q8IWZ8 645 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 ELMOD1Q8N336 334 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 ITFG1Q8TB96 612 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 HPS1Q92902 700 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 CCDC127Q96BQ5 260 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 MCRS1Q96EZ8 462 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 MFSD14AQ96MC6 490 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 TMEM209Q96SK2 561 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 MTMR12Q9C0I1 747 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 SCAND2PQ9GZW5 306 aaPredicted RBP9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 MFSD1Q9H3U5 465 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 DNMT3BQ9UBC3 853 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 MRPS23Q9Y3D9 190 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 C2CD2Q9Y426 696 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 INSL5Q9Y5Q6 135 aa9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.63□□□□□ -0.87
CCDC90B-219ENST00000534753 MTCL1Q9Y4B5 1905 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 PVALEFA0A1B0GWK0 134 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 ANO9A1A5B4 782 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 KPNA7A9QM74 516 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 EIF3DO15371 548 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 TBC1D4O60343 1298 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 SOAT2O75908 522 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 OAZ2O95190 189 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 TNNC2P02585 160 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 RHOP08100 348 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 LAMP2P13473 410 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 ATF2P15336 505 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 TNNI1P19237 187 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 CENPCQ03188 943 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 DUSP4Q13115 394 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 CLN3Q13286 438 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 TDGQ13569 410 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 SLC39A12Q504Y0 691 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 WSCD1Q658N2 575 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 TPGS2Q68CL5 300 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 SCARA3Q6AZY7 606 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 EPM2AIP1Q7L775 607 aaPredicted RBP9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 TCEAL8Q8IYN2 117 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 UBALD2Q8IYN6 164 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 THEM5Q8N1Q8 247 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 ZNF507Q8TCN5 953 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 SCFD1Q8WVM8 642 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 CCDC47Q96A33 483 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 ANKRD36BP1Q96IX9 119 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 ZNF512Q96ME7 567 aaPredicted RBP9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 ZNF560Q96MR9 790 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 KXD1Q9BQD3 176 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 GOLPH3LQ9H4A5 285 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 AGPAT3Q9NRZ7 376 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 AFF4Q9UHB7 1163 aaKnown RBP9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 EGFL7Q9UHF1 273 aa9.62□□□□□ -0.87
CCDC90B-219ENST00000534753 ARHGEF37A1IGU5 675 aa9.61□□□□□ -0.87
CCDC90B-219ENST00000534753 OR6C75A6NL08 312 aa9.61□□□□□ -0.87
CCDC90B-219ENST00000534753 TGFB1I1O43294 461 aa9.61□□□□□ -0.87
CCDC90B-219ENST00000534753 EXOC3O60645 756 aa9.61□□□□□ -0.87
CCDC90B-219ENST00000534753 HUS1O60921 280 aa9.61□□□□□ -0.87
CCDC90B-219ENST00000534753 RPN1P04843 607 aaKnown RBP9.61□□□□□ -0.87
CCDC90B-219ENST00000534753 GJA1P17302 382 aa9.61□□□□□ -0.87
CCDC90B-219ENST00000534753 CEBPBP17676 345 aa9.61□□□□□ -0.87
CCDC90B-219ENST00000534753 TYMPP19971 482 aa9.61□□□□□ -0.87
CCDC90B-219ENST00000534753 HOXA9P31269 272 aa9.61□□□□□ -0.87
CCDC90B-219ENST00000534753 ALDH1A3P47895 512 aa9.61□□□□□ -0.87
CCDC90B-219ENST00000534753 AARSP49588 968 aaKnown RBP eCLIP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms