RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 ATF6P18850 670 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 PCSK1P29120 753 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 GTF2H1P32780 548 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 ASPAP45381 313 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 ALDH1A3P47895 512 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 NOP14P78316 857 aaKnown RBP14.31□□□□□ -0.12
CMTM1-219ENST00000533953 MTMR3Q13615 1198 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 FAM171BQ6P995 826 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 CYP26C1Q6V0L0 522 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 FRMD5Q7Z6J6 570 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 IRF2BP1Q8IU81 584 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 GPIHBP1Q8IV16 184 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 FAM200AQ8TCP9 573 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 MYLPFQ96A32 169 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 MCRS1Q96EZ8 462 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 ZNF512Q96ME7 567 aaPredicted RBP14.31□□□□□ -0.12
CMTM1-219ENST00000533953 VRTNQ9H8Y1 702 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 ZNF334Q9HCZ1 680 aaPredicted RBP14.31□□□□□ -0.12
CMTM1-219ENST00000533953 RAB20Q9NX57 234 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 TMEM63CQ9P1W3 806 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 CDH9Q9ULB4 789 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 MRPS23Q9Y3D9 190 aaKnown RBP14.31□□□□□ -0.12
CMTM1-219ENST00000533953 NR2E1Q9Y466 385 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 DOCK6Q96HP0 2047 aa14.31□□□□□ -0.12
CMTM1-219ENST00000533953 MOSPD3O75425 235 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 CEBPBP17676 345 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 CD58P19256 250 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 BDNFP23560 247 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 NDST1P52848 882 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 EPHB3P54753 998 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 CYP27A1Q02318 531 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 ENPEPQ07075 957 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 OTOP3Q7RTS5 596 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 DNAJB7Q7Z6W7 309 aaPredicted RBP14.3□□□□□ -0.12
CMTM1-219ENST00000533953 ACOT1Q86TX2 421 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 SPATA2LQ8IUW3 424 aaPredicted RBP14.3□□□□□ -0.12
CMTM1-219ENST00000533953 TRIM59Q8IWR1 403 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 SCN4BQ8IWT1 228 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 FBXL13Q8NEE6 735 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 FGF13Q92913 245 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 TWNKQ96RR1 684 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 ARID3AQ99856 593 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 RPP25Q9BUL9 199 aaKnown RBP14.3□□□□□ -0.12
CMTM1-219ENST00000533953 LRRC3Q9BY71 257 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 METTL14Q9HCE5 456 aaKnown RBP14.3□□□□□ -0.12
CMTM1-219ENST00000533953 MAFFQ9ULX9 164 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 BDP1A6H8Y1 2624 aa14.3□□□□□ -0.12
CMTM1-219ENST00000533953 TSC2P49815 1807 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 STX10O60499 249 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 LAMP2P13473 410 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 FMO5P49326 533 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 TUFMP49411 452 aaKnown RBP14.29□□□□□ -0.12
CMTM1-219ENST00000533953 CACNA2D1P54289 1103 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 NFE2Q16621 373 aaPredicted RBP14.29□□□□□ -0.12
CMTM1-219ENST00000533953 PRSS36Q5K4E3 855 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 IQCEQ6IPM2 695 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 RBM43Q6ZSC3 357 aaKnown RBP14.29□□□□□ -0.12
CMTM1-219ENST00000533953 RTL10Q7L3V2 364 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 ZDHHC14Q8IZN3 488 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 SPATA18Q8TC71 538 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 SPPL2BQ8TCT7 592 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 TAF4BQ92750 862 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 ACSF2Q96CM8 615 aaPredicted RBP14.29□□□□□ -0.12
CMTM1-219ENST00000533953 PCED1BQ96HM7 432 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 ZSWIM3Q96MP5 696 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 B3GNT5Q9BYG0 378 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 ZNF518BQ9C0D4 1074 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 TMEM30AQ9NV96 361 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 CDH7Q9ULB5 785 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 USTQ9Y2C2 406 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 C2orf16Q68DN1 1984 aa14.29□□□□□ -0.12
CMTM1-219ENST00000533953 FAM86C2PA6NEL3 165 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 NCOR1O75376 2440 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 MBD3O95983 291 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 POU2F2P09086 479 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 FAM163BP0C2L3 166 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 KCNH2Q12809 1159 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 PLD1Q13393 1074 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 TEAD2Q15562 447 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 TPD52L1Q16890 204 aaPredicted RBP14.28□□□□□ -0.12
CMTM1-219ENST00000533953 ZNF394Q53GI3 561 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 STXBP5Q5T5C0 1151 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 CYP4A22Q5TCH4 519 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 CAVIN1Q6NZI2 390 aaKnown RBP14.28□□□□□ -0.12
CMTM1-219ENST00000533953 FOXR2Q6PJQ5 311 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 PARM1Q6UWI2 310 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 C11orf57Q6ZUT1 292 aaPredicted RBP14.28□□□□□ -0.12
CMTM1-219ENST00000533953 PDZD4Q76G19 769 aaPredicted RBP14.28□□□□□ -0.12
CMTM1-219ENST00000533953 TMC8Q8IU68 726 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 NPAS3Q8IXF0 933 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 ELMOD1Q8N336 334 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 C12orf29Q8N999 325 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 B3GALNT2Q8NCR0 500 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 SHKBP1Q8TBC3 707 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 MYCBPAPQ8TBZ2 947 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 WHAMMQ8TF30 809 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 CNOT6LQ96LI5 555 aaKnown RBP14.28□□□□□ -0.12
CMTM1-219ENST00000533953 BCO2Q9BYV7 579 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 IMPG2Q9BZV3 1241 aa14.28□□□□□ -0.12
CMTM1-219ENST00000533953 ELOVL4Q9GZR5 314 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms