RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 MATKP42679 507 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 IFNAR2P48551 515 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 UCNP55089 124 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 NFATC3Q12968 1075 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 SUZ12Q15022 739 aaKnown RBP11.55□□□□□ -0.56
CSDE1-215ENST00000533818 HSF5Q4G112 596 aaPredicted RBP11.55□□□□□ -0.56
CSDE1-215ENST00000533818 CENPPQ6IPU0 288 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 SYNE3Q6ZMZ3 975 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 ATAD1Q8NBU5 361 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 OSCP1Q8WVF1 389 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 DDX12PQ92771 950 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 ZNF419Q96HQ0 510 aaPredicted RBP11.55□□□□□ -0.56
CSDE1-215ENST00000533818 PRIMPOLQ96LW4 560 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 LGMNQ99538 433 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 RBM28Q9NW13 759 aaKnown RBP11.55□□□□□ -0.56
CSDE1-215ENST00000533818 WNT6Q9Y6F9 365 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 AHCTF1Q8WYP5 2266 aa11.55□□□□□ -0.56
CSDE1-215ENST00000533818 IGHV1OR15-9A0A0B4J2B8 117 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 GNA11P29992 359 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 MCM4P33991 863 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 MCM5P33992 734 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 OPRD1P41143 372 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 PTH1RQ03431 593 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 TARDBPQ13148 414 aaKnown RBP eCLIP11.54□□□□□ -0.56
CSDE1-215ENST00000533818 GPR17Q13304 367 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 MTF1Q14872 753 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 VEPH1Q14D04 833 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 TAF12Q16514 161 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 HLA-BQ31612 363 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 Q4G0T1 1027 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 WDR45BQ5MNZ6 344 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 C6orf132Q5T0Z8 1188 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 EMC10Q5UCC4 262 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 C4orf19Q8IY42 314 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 TTC9BQ8N6N2 239 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 LPIN3Q9BQK8 851 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 SLKQ9H2G2 1235 aaPredicted RBP11.54□□□□□ -0.56
CSDE1-215ENST00000533818 SLC38A7Q9NVC3 462 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 HELZP42694 1942 aaKnown RBP11.54□□□□□ -0.56
CSDE1-215ENST00000533818 RELNP78509 3460 aa11.54□□□□□ -0.56
CSDE1-215ENST00000533818 FBN2P35556 2912 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 A0A1B0GTW7 788 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 LRRIQ4A6NIV6 560 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 BRINP1O60477 761 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 ADAM23O75077 832 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 NDUFS2O75306 463 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 MYF5P13349 255 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 CR2P20023 1033 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 RPL9P32969 192 aaKnown RBP11.53□□□□□ -0.56
CSDE1-215ENST00000533818 CLDN6P56747 220 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 YWHAHQ04917 246 aaPredicted RBP11.53□□□□□ -0.56
CSDE1-215ENST00000533818 PRPF4BQ13523 1007 aaKnown RBP11.53□□□□□ -0.56
CSDE1-215ENST00000533818 FAM187BQ17R55 369 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 EML3Q32P44 896 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 TXNDC8Q6A555 127 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 IL27RAQ6UWB1 636 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 ATG14Q6ZNE5 492 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 SFTPA1Q8IWL2 248 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 EFCAB13Q8IY85 973 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 ENGASEQ8NFI3 743 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 CCDC12Q8WUD4 166 aaPredicted RBP11.53□□□□□ -0.56
CSDE1-215ENST00000533818 FOXJ1Q92949 421 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 NAF1Q96HR8 494 aaKnown RBP11.53□□□□□ -0.56
CSDE1-215ENST00000533818 LXNQ9BS40 222 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 OXCT2Q9BYC2 517 aaPredicted RBP11.53□□□□□ -0.56
CSDE1-215ENST00000533818 CALCOCO1Q9P1Z2 691 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 PCDHB8Q9UN66 801 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 USP20Q9Y2K6 914 aa11.53□□□□□ -0.56
CSDE1-215ENST00000533818 ZNF217O75362 1048 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 OAZ2O95190 189 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 GABRG2P18507 467 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 DDX6P26196 483 aaKnown RBP eCLIP11.52□□□□□ -0.574e-6■□□□□ 10
CSDE1-215ENST00000533818 NMT1P30419 496 aaKnown RBP11.52□□□□□ -0.57
CSDE1-215ENST00000533818 ZNF268Q14587 947 aaPredicted RBP11.52□□□□□ -0.57
CSDE1-215ENST00000533818 RTN1Q16799 776 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 PFKFB3Q16875 520 aaPredicted RBP11.52□□□□□ -0.57
CSDE1-215ENST00000533818 TBC1D25Q3MII6 688 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 EEF1DP3Q658K8 133 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 ERICH1Q86X53 443 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 ETNPPLQ8TBG4 499 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 BICD2Q8TD16 824 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 POLR3FQ9H1D9 316 aaPredicted RBP11.52□□□□□ -0.57
CSDE1-215ENST00000533818 LINC00597Q9H2U6 94 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 ZDHHC4Q9NPG8 344 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 RGL1Q9NZL6 768 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 GMIPQ9P107 970 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 CYP8B1Q9UNU6 501 aa11.52□□□□□ -0.57
CSDE1-215ENST00000533818 TIMM13Q9Y5L4 95 aaPredicted RBP11.52□□□□□ -0.57
CSDE1-215ENST00000533818 USP9YO00507 2555 aaPredicted RBP11.52□□□□□ -0.57
CSDE1-215ENST00000533818 UTP20O75691 2785 aaKnown RBP11.51□□□□□ -0.57
CSDE1-215ENST00000533818 KIAA1549LQ6ZVL6 1849 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 ITPR3Q14573 2671 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 MTMR11A4FU01 709 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 OR6C75A6NL08 312 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 ZBTB24O43167 697 aaPredicted RBP11.51□□□□□ -0.57
CSDE1-215ENST00000533818 TDP2O95551 362 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 GRK6P43250 576 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 VAC14Q08AM6 782 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 PPP2R5CQ13362 524 aa11.51□□□□□ -0.57
CSDE1-215ENST00000533818 DCAF4L1Q3SXM0 396 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms