RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 MARK3P27448 753 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 GJC1P36383 396 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 SLCO1A2P46721 670 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 SNX16P57768 344 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 ZNF252P-AS1Q0IIN9 211 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 QPCTQ16769 361 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 SEZ6Q53EL9 994 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 BBS12Q6ZW61 710 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 WDTC1Q8N5D0 677 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 SLC35B2Q8TB61 432 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 NLRP4Q96MN2 994 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 PRMT1Q99873 361 aaKnown RBP12.6□□□□□ -0.39
ATM-222ENST00000533733 NKIRAS1Q9NYS0 192 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 RBPJLQ9UBG7 517 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 SLC24A2Q9UI40 661 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 ITGA11Q9UKX5 1188 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 DNPEPQ9ULA0 475 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 C2CD2Q9Y426 696 aa12.6□□□□□ -0.39
ATM-222ENST00000533733 RBM47A0AV96 593 aaKnown RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 LRRD1A4D1F6 860 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 TTLL13PA6NNM8 815 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 ANKRD65E5RJM6 399 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 F8VP50 259 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 O00370 1275 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 RNF8O76064 485 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 GH1P01241 217 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 DESP17661 470 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 PHBP35232 272 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 PCK1P35558 622 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 ARSEP51690 589 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 CDC42EP1Q00587 391 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 SLC25A11Q02978 314 aaKnown RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 PTPN11Q06124 597 aaPredicted RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 TRIP13Q15645 432 aaPredicted RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 ANKRD20A8PQ5CZ79 823 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 USP50Q70EL3 339 aaPredicted RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 EEPD1Q7L9B9 569 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 ZNF467Q7Z7K2 595 aaPredicted RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 PACS2Q86VP3 889 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 VSIG1Q86XK7 387 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 AFG1LQ8WV93 481 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 CCT6BQ92526 530 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 LRRC4CQ9HCJ2 640 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 ASNSD1Q9NWL6 643 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 EURLQ9NYK6 297 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 TMEM120BA0PK00 339 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 ALOX15BO15296 676 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 CILPO75339 1184 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 DNAJC8O75937 253 aaPredicted RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 VIMP08670 466 aaKnown RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 BRAFP15056 766 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 CD19P15391 556 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 RAD23BP54727 409 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 PSMC1P62191 440 aaKnown RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 PCBP1Q15365 356 aaKnown RBP eCLIP12.59□□□□□ -0.39
ATM-222ENST00000533733 CCDC142Q17RM4 750 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 PTPN20Q4JDL3 420 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 ZC3H12AQ5D1E8 599 aaKnown RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 LRRC34Q8IZ02 419 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 LINC01465Q8N7H1 131 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 UHMK1Q8TAS1 419 aaKnown RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 CKAP2Q8WWK9 683 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 TFAP2BQ92481 460 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 MCRS1Q96EZ8 462 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 TMEM176AQ96HP8 235 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 MAGEB18Q96M61 343 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 ADPGKQ9BRR6 497 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 DNAI2Q9GZS0 605 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 SYNCQ9H7C4 482 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 RSAD1Q9HA92 442 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 SSU72Q9NP77 194 aaKnown RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 SMG5Q9UPR3 1016 aaKnown RBP12.59□□□□□ -0.39
ATM-222ENST00000533733 SLC45A1Q9Y2W3 748 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 DERAQ9Y315 318 aa12.59□□□□□ -0.39
ATM-222ENST00000533733 EXOC1LA0A1B0GW35 172 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 PRPF4O43172 522 aaKnown RBP eCLIP12.58□□□□□ -0.4
ATM-222ENST00000533733 SUN1O94901 812 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 KRT19P08727 400 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 STAG3L1P0CL83 205 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 SETSIPP0DME0 302 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 CXCL8P10145 99 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 OGDHQ02218 1023 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 INCA1Q0VD86 236 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 GPS1Q13098 491 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 CBLBQ13191 982 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 LLGL1Q15334 1064 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 WDR72Q3MJ13 1102 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 KAZNQ674X7 775 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 VSTM1Q6UX27 236 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 TRIM50Q86XT4 487 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 XYLT1Q86Y38 959 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 FBXO16Q8IX29 292 aaPredicted RBP12.58□□□□□ -0.4
ATM-222ENST00000533733 PPIL6Q8IXY8 311 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 CCDC13Q8IYE1 715 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 C1orf127Q8N9H9 656 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 PPTC7Q8NI37 304 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 FRMD8Q9BZ67 464 aaPredicted RBP12.58□□□□□ -0.4
ATM-222ENST00000533733 OSBPL7Q9BZF2 842 aa12.58□□□□□ -0.4
ATM-222ENST00000533733 SAYSD1Q9NPB0 183 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms