RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 RRAGAQ7L523 313 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 B3GALNT2Q8NCR0 500 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 CMASQ8NFW8 434 aaPredicted RBP17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 WHAMMQ8TF30 809 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 FUBP3Q96I24 572 aaKnown RBP eCLIP17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 MSLNLQ96KJ4 702 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 ERGIC2Q96RQ1 377 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 NT5C1AQ9BXI3 368 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 ABCB6Q9NP58 842 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 SIX2Q9NPC8 291 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 UBE2TQ9NPD8 197 aaPredicted RBP17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 PLCB1Q9NQ66 1216 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 TMLHEQ9NVH6 421 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 ZDHHC7Q9NXF8 308 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 PCDHB5Q9Y5E4 795 aa17.54■□□□□ 0.4
PACSIN3-210ENST00000533686 SEC24AO95486 1093 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 SERPINC1P01008 464 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 C8AP07357 584 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 POU2F2P09086 479 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 HNRNPA1P09651 372 aaKnown RBP eCLIP17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 ACO1P21399 889 aaKnown RBP17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 HOXA9P31269 272 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 MFAP3P55082 362 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 PSMC1P62191 440 aaKnown RBP17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 FANCCQ00597 558 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 DLX2Q07687 328 aaPredicted RBP17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 SYCE2Q6PIF2 218 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 CYP26C1Q6V0L0 522 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 C4orf50Q6ZRC1 276 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 EP400NLQ6ZTU2 488 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 ATAD1Q8NBU5 361 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 KAT5Q92993 513 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 KREMEN1Q96MU8 473 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 PGLYRP2Q96PD5 576 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 TWNKQ96RR1 684 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 RHOBTB2Q9BYZ6 727 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 DPEP3Q9H4B8 488 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 SFXN1Q9H9B4 322 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 CYP4F11Q9HBI6 524 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 HMGXB4Q9UGU5 601 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 DAAM1Q9Y4D1 1078 aa17.53■□□□□ 0.4
PACSIN3-210ENST00000533686 RFX1P22670 979 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 TUFMP49411 452 aaKnown RBP17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 DUSP4Q13115 394 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 CFAP221Q4G0U5 840 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 PPM1LQ5SGD2 360 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 KLHDC7AQ5VTJ3 777 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 ACOT1Q86TX2 421 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 SPATA2LQ8IUW3 424 aaPredicted RBP17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 RNF214Q8ND24 703 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 SLC7A14Q8TBB6 771 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 TMEM176AQ96HP8 235 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 NAP1L5Q96NT1 182 aaPredicted RBP17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 LSM14BQ9BX40 385 aaKnown RBP17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 ELOVL4Q9GZR5 314 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 CNTN6Q9UQ52 1028 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 SIK3Q9Y2K2 1263 aa17.52■□□□□ 0.4
PACSIN3-210ENST00000533686 PRRG1O14668 218 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 HAPLN1P10915 354 aaPredicted RBP17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 KCNA5P22460 613 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 MAGEA11P43364 429 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 RAD23BP54727 409 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 APBA1Q02410 837 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 ITIH3Q06033 890 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 NR1I3Q14994 352 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 SYCP1Q15431 976 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 MDH1BQ5I0G3 518 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 GJB7Q6PEY0 223 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 SLC4A11Q8NBS3 891 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 MYLPFQ96A32 169 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 PCED1BQ96HM7 432 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 S1PR5Q9H228 398 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 CRISPLD1Q9H336 500 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 ABI2Q9NYB9 513 aaPredicted RBP17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 CD207Q9UJ71 328 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 DNAJC12Q9UKB3 198 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 KIAA1257Q9ULG3 409 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 PCDHB4Q9Y5E5 795 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 INSL5Q9Y5Q6 135 aa17.51■□□□□ 0.39
PACSIN3-210ENST00000533686 CCDC195A0A1B0GUA6 201 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 A0A1W2PQC6 194 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 SPDYE4A6NLX3 237 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 TEX33O43247 280 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 RFPL2O75678 378 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 PAEPP09466 180 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 UCHL3P15374 230 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 UBASH3AP57075 661 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 PLD1Q13393 1074 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 CCDC142Q17RM4 750 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 LEXMQ3ZCV2 418 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 TMEM270Q6UE05 265 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 VSTM1Q6UX27 236 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 C12orf76Q8N812 135 aaPredicted RBP17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 SMRP1Q8NCR6 262 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 SHC3Q92529 594 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 LPIN3Q9BQK8 851 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 NAA15Q9BXJ9 866 aaKnown RBP17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 B3GNT5Q9BYG0 378 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 PRKD2Q9BZL6 878 aa17.5■□□□□ 0.39
PACSIN3-210ENST00000533686 ADAM7Q9H2U9 754 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms