RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 TOB1P50616 345 aaPredicted RBP3.4□□□□□ -1.87
ATM-220ENST00000533526 LOXL3P58215 753 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 COL10A1Q03692 680 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 RAB32Q13637 225 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 CNN3Q15417 329 aaKnown RBP3.4□□□□□ -1.87
ATM-220ENST00000533526 PLAC9Q5JTB6 97 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 RBM20Q5T481 1227 aaKnown RBP3.4□□□□□ -1.87
ATM-220ENST00000533526 TEDDM1Q5T9Z0 273 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 RNF220Q5VTB9 566 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 PPP4R4Q6NUP7 873 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 TMEM108Q6UXF1 575 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 CHST15Q7LFX5 561 aaPredicted RBP3.4□□□□□ -1.87
ATM-220ENST00000533526 FMNL3Q8IVF7 1028 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 FAM109AQ8N4B1 249 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 ACTRT2Q8TDY3 377 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 LPIN2Q92539 896 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 ANKS1AQ92625 1134 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 NELL1Q92832 810 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 TSR2Q969E8 191 aaKnown RBP3.4□□□□□ -1.87
ATM-220ENST00000533526 SLC46A1Q96NT5 459 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 DUSP26Q9BV47 211 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 PTDSS2Q9BVG9 487 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 PCGF6Q9BYE7 350 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 TRIM54Q9BYV2 358 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 DPH1Q9BZG8 443 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 SMOC2Q9H3U7 446 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 SYNPO2LQ9H987 977 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 ZMAT3Q9HA38 289 aaKnown RBP3.4□□□□□ -1.87
ATM-220ENST00000533526 OBP2AQ9NY56 170 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 FOXJ2Q9P0K8 574 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 KLHL42Q9P2K6 505 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 SLC17A6Q9P2U8 582 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 STAP2Q9UGK3 403 aa3.4□□□□□ -1.87
ATM-220ENST00000533526 VSTM5A8MXK1 200 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 SUV39H1O43463 412 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 PPFIA2O75334 1257 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 NUDT3O95989 172 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 KITP10721 976 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 TYRP1P17643 537 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 ATF3P18847 181 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 EN2P19622 333 aaPredicted RBP3.39□□□□□ -1.87
ATM-220ENST00000533526 SLC7A1P30825 629 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 SLC11A2P49281 568 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 HNRNPMP52272 730 aaKnown RBP eCLIP3.39□□□□□ -1.87
ATM-220ENST00000533526 CACNA2D1P54289 1103 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 ELLP55199 621 aaPredicted RBP3.39□□□□□ -1.87
ATM-220ENST00000533526 SOX10P56693 466 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 FAM193AP78312 1265 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 SIM1P81133 766 aaPredicted RBP3.39□□□□□ -1.87
ATM-220ENST00000533526 BMPR2Q13873 1038 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 E2F2Q14209 437 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 LLGL1Q15334 1064 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 KRTAP15-1Q3LI76 137 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 MGAT5BQ3V5L5 792 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 TSHZ1Q6ZSZ6 1077 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 CCDC149Q6ZUS6 474 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 C14orf80Q86SX3 495 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 DTX2Q86UW9 622 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 WDR75Q8IWA0 830 aaKnown RBP3.39□□□□□ -1.87
ATM-220ENST00000533526 SLC15A4Q8N697 577 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 DNAJC5GQ8N7S2 189 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 SIMC1Q8NDZ2 872 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 IL31RAQ8NI17 732 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 MYCBPAPQ8TBZ2 947 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 TTC17Q96AE7 1141 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 PBKQ96KB5 322 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 P2RX7Q99572 595 aaKnown RBP3.39□□□□□ -1.87
ATM-220ENST00000533526 ACTRT3Q9BYD9 372 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 ZNF518BQ9C0D4 1074 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 TTYH3Q9C0H2 523 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 LRRC27Q9C0I9 530 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 MRPS18AQ9NVS2 196 aaKnown RBP3.39□□□□□ -1.87
ATM-220ENST00000533526 EHD3Q9NZN3 535 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 TLK1Q9UKI8 766 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 FRMPD2Q68DX3 1309 aaPredicted RBP3.39□□□□□ -1.87
ATM-220ENST00000533526 SALL3Q9BXA9 1300 aa3.39□□□□□ -1.87
ATM-220ENST00000533526 A0A087WWL8 130 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 WDR27A2RRH5 827 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 GCOM1H8Y6P7 765 aaPredicted RBP3.38□□□□□ -1.87
ATM-220ENST00000533526 MYO1FO00160 1098 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 GOLIM4O00461 696 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 KIAA0355O15063 1070 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 KIF3BO15066 747 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 DCLK1O15075 740 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 MGEA5O60502 916 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 TLR5O60602 858 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 NXPH3O95157 252 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 ONECUT2O95948 504 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 CHRM2P08172 466 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 MYBP10242 640 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 NPR1P16066 1061 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 CHRM3P20309 590 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 PPIFP30405 207 aaKnown RBP3.38□□□□□ -1.87
ATM-220ENST00000533526 ALDH9A1P49189 494 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 UCP3P55916 312 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 SLC13A2Q13183 592 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 CTBP1Q13363 440 aa3.38□□□□□ -1.87
ATM-220ENST00000533526 BOP1Q14137 746 aaKnown RBP3.38□□□□□ -1.87
ATM-220ENST00000533526 HLTFQ14527 1009 aaKnown RBP eCLIP3.38□□□□□ -1.877e-8■■■□□ 16.6
ATM-220ENST00000533526 POLD3Q15054 466 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms