RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 POTEHQ6S545 545 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 SV2AQ7L0J3 742 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 ADSSL1Q8N142 457 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 FAM200AQ8TCP9 573 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 TSG101Q99816 390 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 SYT15Q9BQS2 421 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 MRPL45Q9BRJ2 306 aaKnown RBP16.45■□□□□ 0.22
CPSF1-210ENST00000532935 PI4K2AQ9BTU6 479 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 RPP25Q9BUL9 199 aaKnown RBP16.45■□□□□ 0.22
CPSF1-210ENST00000532935 ABCB6Q9NP58 842 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 CDH9Q9ULB4 789 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 MYH10P35580 1976 aa16.45■□□□□ 0.22
CPSF1-210ENST00000532935 MYBPHLA2RUH7 354 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 CETN3O15182 167 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 ATP2C2O75185 946 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 CLSTN1O94985 981 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 PDGFRBP09619 1106 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 TRIM49P0CI25 452 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 TRIM49CP0CI26 452 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 SRFP11831 508 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 GJA1P17302 382 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 GNL1P36915 607 aaPredicted RBP16.44■□□□□ 0.22
CPSF1-210ENST00000532935 PSMC1P62191 440 aaKnown RBP16.44■□□□□ 0.22
CPSF1-210ENST00000532935 ZNF667Q5HYK9 610 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 ANKRD40Q6AI12 368 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 FAM171BQ6P995 826 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 SHKBP1Q8TBC3 707 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 GIPC2Q8TF65 315 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 EEF2KMTQ96G04 330 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 MKNK1Q9BUB5 465 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 SNX25Q9H3E2 840 aa16.44■□□□□ 0.22
CPSF1-210ENST00000532935 ZNF334Q9HCZ1 680 aaPredicted RBP16.44■□□□□ 0.22
CPSF1-210ENST00000532935 A0A1W2PRU2 124 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 PDGFBP01127 241 aaPredicted RBP16.43■□□□□ 0.22
CPSF1-210ENST00000532935 EPB41P11171 864 aaKnown RBP16.43■□□□□ 0.22
CPSF1-210ENST00000532935 CYP2F1P24903 491 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 PMS1P54277 932 aaKnown RBP16.43■□□□□ 0.22
CPSF1-210ENST00000532935 PPP3CAQ08209 521 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 STIM1Q13586 685 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 TEAD2Q15562 447 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 SGSM1Q2NKQ1 1148 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 CFAP221Q4G0U5 840 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 SPATA2LQ8IUW3 424 aaPredicted RBP16.43■□□□□ 0.22
CPSF1-210ENST00000532935 ZC3H3Q8IXZ2 948 aaKnown RBP16.43■□□□□ 0.22
CPSF1-210ENST00000532935 FBXL6Q8N531 539 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 OR6B3Q8NGW1 331 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 ELMO3Q96BJ8 720 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 FUBP3Q96I24 572 aaKnown RBP eCLIP16.43■□□□□ 0.22
CPSF1-210ENST00000532935 KXD1Q9BQD3 176 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 SMYD3Q9H7B4 428 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 CRTAC1Q9NQ79 661 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 RAPGEFL1Q9UHV5 662 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 NME7Q9Y5B8 376 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 ANAPC1Q9H1A4 1944 aa16.43■□□□□ 0.22
CPSF1-210ENST00000532935 TRIM49BA6NDI0 452 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 PSMA7O14818 248 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 ECI2O75521 394 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 FGF19O95750 216 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 HLA-DRAP01903 254 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 CFHP08603 1231 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 CD44P16070 742 aaKnown RBP16.42■□□□□ 0.22
CPSF1-210ENST00000532935 CCNE1P24864 410 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 PPP1R2P41236 205 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 PIK3CAP42336 1068 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 GCLMP48507 274 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 GPR15P49685 360 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 MCCD1P59942 119 aaPredicted RBP16.42■□□□□ 0.22
CPSF1-210ENST00000532935 RPL10AP62906 217 aaKnown RBP16.42■□□□□ 0.22
CPSF1-210ENST00000532935 FKBP3Q00688 224 aaKnown RBP16.42■□□□□ 0.22
CPSF1-210ENST00000532935 LRRC63Q05C16 580 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 MORC3Q14149 939 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 MAPRE1Q15691 268 aaKnown RBP16.42■□□□□ 0.22
CPSF1-210ENST00000532935 TAF12Q16514 161 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 FAM78AQ5JUQ0 283 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 SCARA5Q6ZMJ2 495 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 C4orf50Q6ZRC1 276 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 GAREM2Q75VX8 874 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 SUGP1Q8IWZ8 645 aaKnown RBP16.42■□□□□ 0.22
CPSF1-210ENST00000532935 MYCBPAPQ8TBZ2 947 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 GPR152Q8TDT2 470 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 TAF4BQ92750 862 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 MYLPFQ96A32 169 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 DHTKD1Q96HY7 919 aaPredicted RBP16.42■□□□□ 0.22
CPSF1-210ENST00000532935 ZSWIM3Q96MP5 696 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 ASB16Q96NS5 453 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 MMRN2Q9H8L6 949 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 MAGEC2Q9UBF1 373 aaPredicted RBP16.42■□□□□ 0.22
CPSF1-210ENST00000532935 FBXL21Q9UKT6 434 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 HCN4Q9Y3Q4 1203 aa16.42■□□□□ 0.22
CPSF1-210ENST00000532935 BIN1O00499 593 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 SLC16A3O15427 465 aaKnown RBP16.41■□□□□ 0.22
CPSF1-210ENST00000532935 ASS1P00966 412 aaKnown RBP16.41■□□□□ 0.22
CPSF1-210ENST00000532935 P4HA1P13674 534 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 BMP6P22004 513 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 FCARP24071 287 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 GABRR2P28476 465 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 MAGEA11P43364 429 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 RAP1GAPP47736 663 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 CDH8P55286 799 aa16.41■□□□□ 0.22
CPSF1-210ENST00000532935 DDR2Q16832 855 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms