RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 DCTN4Q9UJW0 460 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 OGTO15294 1046 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 PSD3Q9NYI0 1048 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 NKRFO15226 690 aaKnown RBP eCLIP15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 MCF2P10911 925 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 SERPINB4P48594 390 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 PSMC6P62333 389 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 GIT2Q14161 759 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 TMEM259Q4ZIN3 620 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 PTRHD1Q6GMV3 140 aaKnown RBP15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 ZNF507Q8TCN5 953 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 KIAA1257Q9ULG3 409 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 SMG5Q9UPR3 1016 aaKnown RBP15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 ZNF263O14978 683 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 CDH18Q13634 790 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 KRT72Q14CN4 511 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 Q4G0T1 1027 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 ZC3H12BQ5HYM0 836 aaKnown RBP15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 GPR63Q9BZJ6 419 aa15.43■□□□□ 0.06
PCDHA9-202ENST00000532602 PLEKP08567 350 aaPredicted RBP15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 VGLL4Q14135 290 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 BOLA3Q53S33 107 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 NAPEPLDQ6IQ20 393 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 PKN3Q6P5Z2 889 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 OOSP2Q86WS3 158 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 XPO7Q9UIA9 1087 aaKnown RBP15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 TARSL2A2RTX5 802 aaKnown RBP15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 PHF2O75151 1096 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 SERPIND1P05546 499 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 NAB2Q15742 525 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 PKN1Q16512 942 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 YME1L1Q96TA2 773 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 SMYD3Q9H7B4 428 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 FBXL5Q9UKA1 691 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 MRFAP1Q9Y605 127 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 REREQ9P2R6 1566 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 COMTP21964 271 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 CNTN2Q02246 1040 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 SPATA4Q8NEY3 305 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 STOML1Q9UBI4 398 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 PKP3Q9Y446 797 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 C5orf58C9J3I9 102 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 SMIM22K7EJ46 135 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 CYB561D2O14569 222 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 MAP3K6O95382 1288 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 POMCP01189 267 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 RPL10AP62906 217 aaKnown RBP15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 CUL2Q13617 745 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 FRMD8Q9BZ67 464 aaPredicted RBP15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 FRMD3A2A2Y4 597 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 SPRP35270 261 aaPredicted RBP15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 PTK6Q13882 451 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 USP10Q14694 798 aaKnown RBP15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 MPZL3Q6UWV2 235 aa15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 CDV3Q9UKY7 258 aaKnown RBP15.42■□□□□ 0.06
PCDHA9-202ENST00000532602 RICTORQ6R327 1708 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 ANGPT2O15123 496 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 AKAP5P24588 427 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 LAMTOR4Q0VGL1 99 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 FAM83AQ86UY5 434 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 RNF19AQ9NV58 838 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 SNTG2Q9NY99 539 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 SNX12Q9UMY4 172 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 GMNCA6NCL1 334 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 GYPCP04921 128 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 TMEM253P0C7T8 217 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 ELAVL2Q12926 359 aaKnown RBP15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 MOB2Q70IA6 237 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 URODP06132 367 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 NAMPTP43490 491 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 ZNF177Q13360 481 aaPredicted RBP15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 PTPAQ15257 358 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 COBLL1Q53SF7 1204 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 SALL1Q9NSC2 1324 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 PRR23AA6NEV1 266 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 MAP3K7CLP57077 242 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 BYSLQ13895 437 aaKnown RBP15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 EARS2Q5JPH6 523 aaKnown RBP15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 RNF168Q8IYW5 571 aaPredicted RBP15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 SHCBP1Q8NEM2 672 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 ATP6V1G3Q96LB4 118 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 PURBQ96QR8 312 aaKnown RBP15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 RBM15Q96T37 977 aaKnown RBP eCLIP15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 OSBPL8Q9BZF1 889 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 DSEQ9UL01 958 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 TIMM13Q9Y5L4 95 aaPredicted RBP15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 CDH16O75309 829 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 AP1G2O75843 785 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 F9P00740 461 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 POLBP06746 335 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 KRT16P08779 473 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 MED21Q13503 144 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 TAGAPQ8N103 731 aa15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 WARS2Q9UGM6 360 aaKnown RBP15.41■□□□□ 0.06
PCDHA9-202ENST00000532602 RPSAP08865 295 aaKnown RBP15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 GARTP22102 1010 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 BEX3Q00994 111 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 GRIK4Q16099 956 aa15.4■□□□□ 0.06
PCDHA9-202ENST00000532602 PRAMEF19Q5SWL8 479 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms