RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 KIAA0319Q5VV43 1072 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 LLGL2Q6P1M3 1020 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 DSTYKQ6XUX3 929 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 MCOLN2Q8IZK6 566 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 CRYBG2Q8N1P7 616 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 RAD9AQ99638 391 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 SNX25Q9H3E2 840 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 OSGEPQ9NPF4 335 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 COG5Q9UP83 839 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 ATMINO43313 823 aaPredicted RBP23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 TLL1O43897 1013 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 PTP4A2Q12974 167 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 CCDC142Q17RM4 750 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 PPP1R26Q5T8A7 1209 aaPredicted RBP23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 TRIM72Q6ZMU5 477 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 PHLDB2Q86SQ0 1253 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 SLC35G2Q8TBE7 412 aa23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.31■■□□□ 1.32
PACSIN3-209ENST00000532457 MYH10P35580 1976 aa23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 TBKBP1A7MCY6 615 aa23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 KIF2AO00139 706 aaPredicted RBP23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 MICAL2O94851 1124 aa23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 FAM163BP0C2L3 166 aa23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 CDH5P33151 784 aaPredicted RBP23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 GPC5P78333 572 aa23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 SGO2Q562F6 1265 aa23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 TXLNBQ8N3L3 684 aa23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 RNF10Q8N5U6 811 aaKnown RBP23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 C1orf131Q8NDD1 294 aaKnown RBP23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 MRPL9Q9BYD2 267 aaKnown RBP23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 MYO1AQ9UBC5 1043 aa23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 KIAA1257Q9ULG3 409 aa23.3■■□□□ 1.32
PACSIN3-209ENST00000532457 M0QZQ0 153 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 ACAT1P24752 427 aaKnown RBP23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 OR1G1P47890 313 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 CDR1P51861 262 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 HTRA4P83105 476 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 MON1BQ7L1V2 547 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 UBA3Q8TBC4 463 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 CTNNBL1Q8WYA6 563 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 ZNF689Q96CS4 500 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 RTP3Q9BQQ7 232 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 LHX5Q9H2C1 402 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 FAM49BQ9NUQ9 324 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 COLQQ9Y215 455 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 FNDC1Q4ZHG4 1894 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 NCANO14594 1321 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 A0A0A6YYK5 440 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 MED7O43513 233 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 TUBB4AP04350 444 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 LCLAT1Q6UWP7 414 aa23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 PHF13Q86YI8 300 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 FAM193BQ96PV7 902 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 PRG3Q9Y2Y8 225 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-209ENST00000532457 PTPRSQ13332 1948 aa23.28■■□□□ 1.32
PACSIN3-209ENST00000532457 CYP1A2P05177 515 aa23.28■■□□□ 1.32
PACSIN3-209ENST00000532457 NOP2P46087 812 aaKnown RBP23.28■■□□□ 1.32
PACSIN3-209ENST00000532457 NAP1L1P55209 391 aaKnown RBP23.28■■□□□ 1.32
PACSIN3-209ENST00000532457 KIF18AQ8NI77 898 aa23.28■■□□□ 1.32
PACSIN3-209ENST00000532457 SUSD3Q96L08 255 aa23.28■■□□□ 1.32
PACSIN3-209ENST00000532457 NOX5Q96PH1 765 aa23.28■■□□□ 1.32
PACSIN3-209ENST00000532457 GRID2IPA4D2P6 1211 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 NRP1O14786 923 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 LSM8O95777 96 aaKnown RBP23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 CASQ1P31415 396 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 GPD2P43304 727 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 NSFP46459 744 aaKnown RBP23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 PSMC1P62191 440 aaKnown RBP23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 BTG3Q14201 252 aaPredicted RBP23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 MMS22LQ6ZRQ5 1243 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 CMTR2Q8IYT2 770 aaKnown RBP23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 TMEM35BQ8NCS4 154 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 TPCN2Q8NHX9 752 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 RFFLQ8WZ73 363 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 C11orf70Q9BRQ4 267 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 RC3H2Q9HBD1 1191 aaKnown RBP23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 DDX43Q9NXZ2 648 aaKnown RBP23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 TJP2Q9UDY2 1190 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 TSPAN16Q9UKR8 245 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 PCDHA11Q9Y5I1 949 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 COL4A6Q14031 1691 aa23.27■■□□□ 1.32
PACSIN3-209ENST00000532457 ENC1O14682 589 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 PALMO75781 387 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 CCDC130P13994 396 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 MMP8P22894 467 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 RRM1P23921 792 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 PBX3P40426 434 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 SLC11A1P49279 550 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 PKDCCQ504Y2 493 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 TTC30AQ86WT1 665 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 TMEM86AQ8N2M4 240 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 LRRC43Q8N309 656 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 ZNF653Q96CK0 615 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 GOLPH3Q9H4A6 298 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 ADAM22Q9P0K1 906 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 TMEM189-UBE2V1I3L0A0 370 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 CYP11A1P05108 521 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 PTPN1P18031 435 aaKnown RBP23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 TCEAL1Q15170 157 aa23.26■■□□□ 1.31
PACSIN3-209ENST00000532457 RAB30Q15771 203 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms