RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CNNM4Q6P4Q7 775 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 STXBP4Q6ZWJ1 553 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 DDX53Q86TM3 631 aaKnown RBP6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 RBM23Q86U06 439 aaKnown RBP6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 LSRQ86X29 649 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 MAP4K3Q8IVH8 894 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 SYCP3Q8IZU3 236 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 VPS52Q8N1B4 723 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 PPM1KQ8N3J5 372 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 MRPL43Q8N983 215 aaKnown RBP6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 BCL7CQ8WUZ0 217 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 ATXN2LQ8WWM7 1075 aaKnown RBP6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 GATAD2BQ8WXI9 593 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 IPO9Q96P70 1041 aaKnown RBP6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 ACCSQ96QU6 501 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 MSTO1Q9BUK6 570 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 MIR1-1HGQ9H1L0 117 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 CXCL16Q9H2A7 254 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 BLZF1Q9H2G9 400 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 CHRDQ9H2X0 955 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 IGFLR1Q9H665 355 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 TLE6Q9H808 572 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 TMEM206Q9H813 350 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 PPCSQ9HAB8 311 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 SLC38A7Q9NVC3 462 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 CLDND1Q9NY35 253 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZNF180Q9UJW8 692 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 HPSEQ9Y251 543 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 MRPS23Q9Y3D9 190 aaKnown RBP6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 PCDHGC5Q9Y5F6 944 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 CHD9Q3L8U1 2897 aa6.27□□□□□ -1.41
HMGB1P42-201ENST00000532126 COL4A4P53420 1690 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 A0A0B4J269 797 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 FAM237AA0A1B0GTK4 181 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 PVALEFA0A1B0GWK0 134 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 A0A1W2PP55 124 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 FSD2A1L4K1 749 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 C2orf71A6NGG8 1288 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CASTOR2A6NHX0 329 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 HIDE1A8MVS5 230 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 ANKRD63C9JTQ0 380 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 PER2O15055 1255 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 OGTO15294 1046 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZNF500O60304 480 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 BRINP1O60477 761 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 FBXO24O75426 580 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 B3GAT3O94766 335 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CXCL14O95715 111 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 SOD2P04179 222 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 SRGAP2BP0DMP2 458 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CXCL8P10145 99 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 ARAFP10398 606 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CTSAP10619 480 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 KCNE1P15382 129 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 TFE3P19532 575 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 KCNA5P22460 613 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CASP1P29466 404 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CASP2P42575 452 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 PLA2G4AP47712 749 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CASP5P51878 434 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 TFF2Q03403 129 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 PPP2R3AQ06190 1150 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CUL4BQ13620 913 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 MAP7Q14244 749 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 HSP90AA2PQ14568 343 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 NCAPHQ15003 741 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 POSTNQ15063 836 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 NAB2Q15742 525 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 DUSP6Q16828 381 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 SLC10A6Q3KNW5 377 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 XKR4Q5GH76 650 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 FAM26FQ5R3K3 315 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CXorf57Q6NSI4 855 aaKnown RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 KIAA1841Q6NSI8 718 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 SLC39A4Q6P5W5 647 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 C6orf15Q6UXA7 325 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 ALKAL1Q6UXT8 129 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 UNC13DQ70J99 1090 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 ADGRD2Q7Z7M1 963 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 NLRP8Q86W28 1048 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 GRAMD1CQ8IYS0 662 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 EFHBQ8N7U6 833 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 C1orf127Q8N9H9 656 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 FSIP1Q8NA03 581 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 POMGNT1Q8WZA1 660 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 RABGGTAQ92696 567 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 HPS3Q969F9 1004 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 ITPKCQ96DU7 683 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 PABPC5Q96DU9 382 aaKnown RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 PAGE5Q96GU1 130 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CCDC34Q96HJ3 373 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 SNX27Q96L92 541 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 UROC1Q96N76 676 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 ASB2Q96Q27 587 aa6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 PPP1R10Q96QC0 940 aaKnown RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 CDCA3Q99618 268 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P42-201ENST00000532126 SMAD5Q99717 465 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms