RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 WNT3P56703 355 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 TSPY1Q01534 308 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 WASHC5Q12768 1159 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 CHAF1BQ13112 559 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 SLC29A2Q14542 456 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 SMC1AQ14683 1233 aaKnown RBP4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 GPR68Q15743 365 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 CTXN3Q4LDR2 81 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 PABPC1LQ4VXU2 614 aaKnown RBP4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 TMTC4Q5T4D3 741 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 RRAGBQ5VZM2 374 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 KANK2Q63ZY3 851 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 BICRALQ6AI39 1079 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 ANO7Q6IWH7 933 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 RPUSD3Q6P087 351 aaKnown RBP4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 CEP128Q6ZU80 1094 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 CHD1LQ86WJ1 897 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 MIB1Q86YT6 1006 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 GALNT13Q8IUC8 556 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 FAM126BQ8IXS8 530 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 DNAJC5GQ8N7S2 189 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 DCBLD1Q8N8Z6 715 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 MSANTD4Q8NCY6 345 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 NUP43Q8NFH3 380 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 IL17RDQ8NFM7 739 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 OR56A3Q8NH54 315 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 SCAMP5Q8TAC9 235 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 CPT1BQ92523 772 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 CNDP2Q96KP4 475 aaKnown RBP4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 EYA3Q99504 573 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 NCAPGQ9BPX3 1015 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 SIK2Q9H0K1 926 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 DBNDD1Q9H9R9 158 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 ERVK-5Q9HDB9 667 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 EIF2B3Q9NR50 452 aaKnown RBP4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 ATP8A2Q9NTI2 1148 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 TBC1D23Q9NUY8 699 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 MOCS1Q9NZB8 636 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 LMCD1Q9NZU5 365 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 EPS15L1Q9UBC2 864 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 SAE1Q9UBE0 346 aaPredicted RBP4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 TRPS1Q9UHF7 1281 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 MID2Q9UJV3 735 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 ZMYND8Q9ULU4 1186 aaPredicted RBP4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 PLAGL2Q9UPG8 496 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 CNPY2Q9Y2B0 182 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 ZNF711Q9Y462 761 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 LYVE1Q9Y5Y7 322 aa4.81□□□□□ -1.64
AC055878.1-201ENST00000531858 LOC102723971A0A1B0GUV8 181 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 AQP7P3A6NL99 342 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 FYB1O15117 783 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 COQ9O75208 318 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 RASSF9O75901 435 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CSPG5O95196 566 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CCNDBP1O95273 360 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 MLYCDO95822 493 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 LRG1P02750 347 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CYBBP04839 570 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CLEC3BP05452 202 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CD1AP06126 327 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 FAM200BP0CF97 657 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CSH1P0DML2 217 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CSH2P0DML3 217 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 GAAP10253 952 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 JUPP14923 745 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 PFKLP17858 780 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 RXRAP19793 462 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 TACR1P25103 407 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 ACTN2P35609 894 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 PIK3CAP42336 1068 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 KCNC1P48547 511 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 SLC11A2P49281 568 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CCT4P50991 539 aaKnown RBP4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 MLLT6P55198 1093 aaPredicted RBP4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CYP4F8P98187 520 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CREB5Q02930 508 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CD69Q07108 199 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 SP140Q13342 867 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 PUM1Q14671 1186 aaKnown RBP eCLIP4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 NFIXQ14938 502 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 RASA2Q15283 850 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 INSCQ1MX18 579 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 NRN1LQ496H8 165 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 AMOTQ4VCS5 1084 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 TTC22Q5TAA0 569 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 FAXCQ5TGI0 409 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 VASNQ6EMK4 673 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 PLBD1Q6P4A8 553 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 C11orf88Q6PI97 169 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 PAQR3Q6TCH7 311 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 LRSAM1Q6UWE0 723 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 ABHD15Q6UXT9 468 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 USP49Q70CQ1 688 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 IRF2BP1Q8IU81 584 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 PLXDC1Q8IUK5 500 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 CCDC28AQ8IWP9 274 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 DIS3L2Q8IYB7 885 aaKnown RBP4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 AOPEPQ8N6M6 819 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 NETO1Q8TDF5 533 aa4.8□□□□□ -1.64
AC055878.1-201ENST00000531858 WDR60Q8WVS4 1066 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms