RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 N4BP2L1Q5TBK1 243 aaPredicted RBP18.69■□□□□ 0.58
PKP3-208ENST00000531857 NAIF1Q69YI7 327 aaPredicted RBP18.69■□□□□ 0.58
PKP3-208ENST00000531857 TXNDC8Q6A555 127 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 ADALQ6DHV7 355 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 C12orf50Q8NA57 414 aaPredicted RBP18.69■□□□□ 0.58
PKP3-208ENST00000531857 C2orf15Q8WU43 125 aaKnown RBP18.69■□□□□ 0.58
PKP3-208ENST00000531857 DDX1Q92499 740 aaKnown RBP18.69■□□□□ 0.58
PKP3-208ENST00000531857 LOXL4Q96JB6 756 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 SMOC1Q9H4F8 434 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 ASB7Q9H672 318 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 SLC8A2Q9UPR5 921 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 C2CD2Q9Y426 696 aa18.69■□□□□ 0.58
PKP3-208ENST00000531857 CCDC163A0A0D9SF12 145 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 RNF40O75150 1001 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 CCDC192P0DO97 292 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 PLCG1P19174 1290 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 AVPR1AP37288 418 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 UBA7P41226 1012 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 GRIN1Q05586 938 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 BFSP1Q12934 665 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 SDHAF4Q5VUM1 108 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 CRELD2Q6UXH1 353 aaPredicted RBP18.68■□□□□ 0.58
PKP3-208ENST00000531857 EFCAB13Q8IY85 973 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 RAD54LQ92698 747 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 CALML4Q96GE6 196 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 AK8Q96MA6 479 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 CCSER1Q9C0I3 900 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 TDP1Q9NUW8 608 aa18.68■□□□□ 0.58
PKP3-208ENST00000531857 AGO2Q9UKV8 859 aaKnown RBP18.68■□□□□ 0.58
PKP3-208ENST00000531857 ZFHX4Q86UP3 3567 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 CFAP47Q6ZTR5 3102 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 KPNA7A9QM74 516 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 ATG13O75143 517 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 KRT18P05783 430 aaKnown RBP18.67■□□□□ 0.58
PKP3-208ENST00000531857 GALK1P51570 392 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 SMARCB1Q12824 385 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 KARSQ15046 597 aaKnown RBP18.67■□□□□ 0.58
PKP3-208ENST00000531857 PLA2G2CQ5R387 149 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 STPG1Q5TH74 334 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 PI4K2AQ9BTU6 479 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 ZMYM5Q9UJ78 669 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 MAGED2Q9UNF1 606 aaPredicted RBP18.67■□□□□ 0.58
PKP3-208ENST00000531857 PCDHB5Q9Y5E4 795 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 STYXL1Q9Y6J8 313 aa18.67■□□□□ 0.58
PKP3-208ENST00000531857 THADAQ6YHU6 1953 aa18.66■□□□□ 0.58
PKP3-208ENST00000531857 SLC26A4O43511 780 aa18.66■□□□□ 0.58
PKP3-208ENST00000531857 PMLP29590 882 aa18.66■□□□□ 0.58
PKP3-208ENST00000531857 WNT7BP56706 349 aa18.66■□□□□ 0.58
PKP3-208ENST00000531857 SCARA3Q6AZY7 606 aa18.66■□□□□ 0.58
PKP3-208ENST00000531857 MON1AQ86VX9 555 aa18.66■□□□□ 0.58
PKP3-208ENST00000531857 DCP1BQ8IZD4 617 aaKnown RBP18.66■□□□□ 0.58
PKP3-208ENST00000531857 EZH1Q92800 747 aaPredicted RBP18.66■□□□□ 0.58
PKP3-208ENST00000531857 ZC3H10Q96K80 434 aaKnown RBP18.66■□□□□ 0.58
PKP3-208ENST00000531857 HHIPQ96QV1 700 aa18.66■□□□□ 0.58
PKP3-208ENST00000531857 ANGPTL2Q9UKU9 493 aa18.66■□□□□ 0.58
PKP3-208ENST00000531857 CIZ1Q9ULV3 898 aaPredicted RBP18.66■□□□□ 0.58
PKP3-208ENST00000531857 KIF3AQ9Y496 699 aa18.66■□□□□ 0.58
PKP3-208ENST00000531857 CHD6Q8TD26 2715 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 ABCA7Q8IZY2 2146 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 PTPRDP23468 1912 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 H3BQV1 296 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 TBCAO75347 108 aaKnown RBP18.65■□□□□ 0.58
PKP3-208ENST00000531857 PRPF40AO75400 957 aaKnown RBP18.65■□□□□ 0.58
PKP3-208ENST00000531857 TADA3O75528 432 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 DDX6P26196 483 aaKnown RBP eCLIP18.65■□□□□ 0.58
PKP3-208ENST00000531857 GJB2P29033 226 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 ADSSP30520 456 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 DDR2Q16832 855 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 SV2CQ496J9 727 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 SLFN12LQ6IEE8 588 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 TCEAL6Q6IPX3 200 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 CC2D1AQ6P1N0 951 aaPredicted RBP18.65■□□□□ 0.58
PKP3-208ENST00000531857 TCEAL3Q969E4 200 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 KIF9Q9HAQ2 790 aa18.65■□□□□ 0.58
PKP3-208ENST00000531857 DCLK1O15075 740 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 AKAP3O75969 853 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 CYP2F1P24903 491 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 GJA4P35212 333 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 MPLP40238 635 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 PLK5Q496M5 336 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 PDCL2Q8N4E4 241 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 CAMKK1Q8N5S9 505 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 ZSWIM2Q8NEG5 633 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 RPLP0P6Q8NHW5 317 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 POMGNT1Q8WZA1 660 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 MRPS31Q92665 395 aaKnown RBP18.64■□□□□ 0.57
PKP3-208ENST00000531857 SLC22A12Q96S37 553 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 CYP2S1Q96SQ9 504 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 P2RY13Q9BPV8 354 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 DUSP15Q9H1R2 295 aaPredicted RBP18.64■□□□□ 0.57
PKP3-208ENST00000531857 ST6GALNAC4Q9H4F1 302 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 PCDHGA5Q9Y5G8 931 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 FRYQ5TBA9 3013 aa18.64■□□□□ 0.57
PKP3-208ENST00000531857 TULP1O00294 542 aaPredicted RBP18.63■□□□□ 0.57
PKP3-208ENST00000531857 CSH1P0DML2 217 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 CSH2P0DML3 217 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 DRD1P21728 446 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 ACAT1P24752 427 aaKnown RBP18.63■□□□□ 0.57
PKP3-208ENST00000531857 ABCD1P33897 745 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 TSPY1Q01534 308 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms