RNA–Protein interactions for RNA: ENST00000531637.5

USP33-217, Transcript of ubiquitin specific peptidase 33, human

TSL 3

Gene USP33, Length 384 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP33-217	ENST00000531637	SPOCD1	Q6ZMY3	1216 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	GATAD2A	Q86YP4	633 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	SYT8	Q8NBV8	401 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	PSD4	Q8NDX1	1056 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	FAM71B	Q8TC56	605 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	GCC1	Q96CN9	775 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	ZNF668	Q96K58	619 aa	Predicted RBP	6.59	□□□□□ -1.35
USP33-217	ENST00000531637	TMEM120A	Q9BXJ8	343 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	GPR87	Q9BY21	358 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	TTYH3	Q9C0H2	523 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
USP33-217	ENST00000531637	GJB4	Q9NTQ9	266 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	PPP4R1L	Q9P1A2	415 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	LRFN1	Q9P244	771 aa		6.59	□□□□□ -1.35
USP33-217	ENST00000531637	TRIM24	O15164	1050 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	IRAK2	O43187	625 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	KCNQ3	O43525	872 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	VPS4B	O75351	444 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	KCNA2	P16389	499 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	ITGAL	P20701	1170 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	PXN	P49023	591 aa	Predicted RBP	6.58	□□□□□ -1.36
USP33-217	ENST00000531637	PPFIA1	Q13136	1202 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	PTK2B	Q14289	1009 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	SPARCL1	Q14515	664 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	CSRP2	Q16527	193 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	UBXN11	Q5T124	520 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	FAM102A	Q5T9C2	384 aa	Predicted RBP	6.58	□□□□□ -1.36
USP33-217	ENST00000531637	MRNIP	Q6NTE8	343 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	GGT6	Q6P531	493 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	CLNK	Q7Z7G1	428 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	FAM9A	Q8IZU1	332 aa	Predicted RBP	6.58	□□□□□ -1.36
USP33-217	ENST00000531637	ATG16L2	Q8NAA4	619 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	OR56A1	Q8NGH5	318 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	MARS2	Q96GW9	593 aa	Known RBP	6.58	□□□□□ -1.36
USP33-217	ENST00000531637	MNT	Q99583	582 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	OBP2B	Q9NPH6	170 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	EIF2B4	Q9UI10	523 aa	Known RBP	6.58	□□□□□ -1.36
USP33-217	ENST00000531637	ANAPC4	Q9UJX5	808 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637	CA14	Q9ULX7	337 aa		6.58	□□□□□ -1.36
USP33-217	ENST00000531637		A0A1B0GTW7	788 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	DBX1	A6NMT0	343 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	TOR1B	O14657	336 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	NPC1	O15118	1278 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	ERN1	O75460	977 aa	Known RBP	6.57	□□□□□ -1.36
USP33-217	ENST00000531637	GLP2R	O95838	553 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	GPANK1	O95872	356 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	C8A	P07357	584 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	GABRB3	P28472	473 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	GCLC	P48506	637 aa	Predicted RBP	6.57	□□□□□ -1.36
USP33-217	ENST00000531637	PTDSS1	P48651	473 aa	Known RBP	6.57	□□□□□ -1.36
USP33-217	ENST00000531637	RABGGTB	P53611	331 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	CNGB1	Q14028	1251 aa	Predicted RBP	6.57	□□□□□ -1.36
USP33-217	ENST00000531637	MAPKAPK3	Q16644	382 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	PREPL	Q4J6C6	727 aa	Predicted RBP	6.57	□□□□□ -1.36
USP33-217	ENST00000531637	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	6.57	□□□□□ -1.36
USP33-217	ENST00000531637	PLAG1	Q6DJT9	500 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	SFRP4	Q6FHJ7	346 aa	Predicted RBP	6.57	□□□□□ -1.36
USP33-217	ENST00000531637	CCDC70	Q6NSX1	233 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	POC1B	Q8TC44	478 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	GDF15	Q99988	308 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	MAGEH1	Q9H213	219 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	ZBTB26	Q9HCK0	441 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	CASS4	Q9NQ75	786 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	KCNE5	Q9UJ90	142 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	USP15	Q9Y4E8	981 aa	Predicted RBP	6.57	□□□□□ -1.36
USP33-217	ENST00000531637	DUSP10	Q9Y6W6	482 aa		6.57	□□□□□ -1.36
USP33-217	ENST00000531637	LGALS16	A8MUM7	142 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	ACKR2	O00590	384 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	FOXS1	O43638	330 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	PRSS23	O95084	383 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	NDST3	O95803	873 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	ITGA5	P08648	1049 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	EGR1	P18146	543 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	CFP	P27918	469 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	PPIF	P30405	207 aa	Known RBP	6.56	□□□□□ -1.36
USP33-217	ENST00000531637	SERPINF1	P36955	418 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	ANXA11	P50995	505 aa	Known RBP	6.56	□□□□□ -1.36
USP33-217	ENST00000531637	CRHR2	Q13324	411 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	FAXC	Q5TGI0	409 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	CACHD1	Q5VU97	1274 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	ARMC6	Q6NXE6	501 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	TAF2	Q6P1X5	1199 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	ZDHHC24	Q6UX98	284 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	SIAH1	Q8IUQ4	282 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	SYT12	Q8IV01	421 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	GLIS1	Q8NBF1	620 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	FEZF2	Q8TBJ5	459 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	NELL2	Q99435	816 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	TMOD4	Q9NZQ9	345 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
USP33-217	ENST00000531637	MTO1	Q9Y2Z2	717 aa	Known RBP	6.56	□□□□□ -1.36
USP33-217	ENST00000531637	CDY1	Q9Y6F8	540 aa		6.56	□□□□□ -1.36
USP33-217	ENST00000531637	SPATA31A3	Q5VYP0	1347 aa		6.55	□□□□□ -1.36
USP33-217	ENST00000531637		H7C4K7	107 aa		6.55	□□□□□ -1.36
USP33-217	ENST00000531637	RRP9	O43818	475 aa	Known RBP	6.55	□□□□□ -1.36
USP33-217	ENST00000531637	CCNT2	O60583	730 aa	Known RBP	6.55	□□□□□ -1.36
USP33-217	ENST00000531637	COQ9	O75208	318 aa		6.55	□□□□□ -1.36
USP33-217	ENST00000531637	PPFIA4	O75335	1185 aa		6.55	□□□□□ -1.36
USP33-217	ENST00000531637	PIAS2	O75928	621 aa		6.55	□□□□□ -1.36
USP33-217	ENST00000531637	DHRS4L1	P0CG22	281 aa		6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms