RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	CBWD6	Q4V339	395 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	CBWD3	Q5JTY5	395 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	CBWD5	Q5RIA9	395 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	FBXL13	Q8NEE6	735 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	ZNF512	Q96ME7	567 aa	Predicted RBP	27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	SDCBP2	Q9H190	292 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	APOBEC3G	Q9HC16	384 aa	Known RBP	27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	ABCB6	Q9NP58	842 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	CRTAC1	Q9NQ79	661 aa		27.58	■■■□□ 2.01
PICALM-215	ENST00000531558	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	27.58	■■■□□ 2.01	2e-6	■■■■■ 41
PICALM-215	ENST00000531558	GNA14	O95837	355 aa		27.57	■■■□□ 2
PICALM-215	ENST00000531558	CDH8	P55286	799 aa		27.57	■■■□□ 2
PICALM-215	ENST00000531558	RBM43	Q6ZSC3	357 aa	Known RBP	27.57	■■■□□ 2
PICALM-215	ENST00000531558	CCDC150	Q8NCX0	1101 aa		27.57	■■■□□ 2
PICALM-215	ENST00000531558	ITFG1	Q8TB96	612 aa		27.57	■■■□□ 2
PICALM-215	ENST00000531558	SEMA4D	Q92854	862 aa		27.57	■■■□□ 2
PICALM-215	ENST00000531558	MED15	Q96RN5	788 aa		27.57	■■■□□ 2
PICALM-215	ENST00000531558	SRRT	Q9BXP5	876 aa	Known RBP	27.57	■■■□□ 2
PICALM-215	ENST00000531558	EPS15L1	Q9UBC2	864 aa		27.57	■■■□□ 2
PICALM-215	ENST00000531558	MUTYH	Q9UIF7	546 aa		27.57	■■■□□ 2
PICALM-215	ENST00000531558	FGFR1OP	O95684	399 aa	Known RBP	27.56	■■■□□ 2
PICALM-215	ENST00000531558	ATF6	P18850	670 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558	MAPRE1	Q15691	268 aa	Known RBP	27.56	■■■□□ 2
PICALM-215	ENST00000531558	SLC5A9	Q2M3M2	681 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558	CFAP221	Q4G0U5	840 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558	SPATA2L	Q8IUW3	424 aa	Predicted RBP	27.56	■■■□□ 2
PICALM-215	ENST00000531558	LEMD2	Q8NC56	503 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558	MYLPF	Q96A32	169 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558	FUBP3	Q96I24	572 aa	Known RBP eCLIP	27.56	■■■□□ 2
PICALM-215	ENST00000531558	BCO2	Q9BYV7	579 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558	NIF3L1	Q9GZT8	377 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558	ASAH2	Q9NR71	780 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558	RAB20	Q9NX57	234 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558	DACH1	Q9UI36	760 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558	MRPS23	Q9Y3D9	190 aa	Known RBP	27.56	■■■□□ 2
PICALM-215	ENST00000531558	ASB3	Q9Y575	518 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558	DOCK6	Q96HP0	2047 aa		27.56	■■■□□ 2
PICALM-215	ENST00000531558		A8MXQ7	604 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	DCX	O43602	365 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	LRRN2	O75325	713 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	EPHA5	P54756	1037 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	MARS	P56192	900 aa	Known RBP	27.55	■■■□□ 2
PICALM-215	ENST00000531558	PRSS36	Q5K4E3	855 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	C4orf50	Q6ZRC1	276 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	PDZD4	Q76G19	769 aa	Predicted RBP	27.55	■■■□□ 2
PICALM-215	ENST00000531558	HS6ST3	Q8IZP7	471 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	MYCBPAP	Q8TBZ2	947 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	PSMG2	Q969U7	264 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	DPEP3	Q9H4B8	488 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	LIMD1	Q9UGP4	676 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	CDH7	Q9ULB5	785 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	COQ4	Q9Y3A0	265 aa		27.55	■■■□□ 2
PICALM-215	ENST00000531558	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	27.55	■■■□□ 2
PICALM-215	ENST00000531558	LAMP2	P13473	410 aa		27.54	■■■□□ 2
PICALM-215	ENST00000531558	CYP2F1	P24903	491 aa		27.54	■■■□□ 2
PICALM-215	ENST00000531558	VEPH1	Q14D04	833 aa		27.54	■■■□□ 2
PICALM-215	ENST00000531558	CYP4A22	Q5TCH4	519 aa		27.54	■■■□□ 2
PICALM-215	ENST00000531558	ITIH5	Q86UX2	942 aa		27.54	■■■□□ 2
PICALM-215	ENST00000531558	FGF13	Q92913	245 aa		27.54	■■■□□ 2
PICALM-215	ENST00000531558	NOTCH4	Q99466	2003 aa		27.54	■■■□□ 2
PICALM-215	ENST00000531558	LPIN3	Q9BQK8	851 aa		27.54	■■■□□ 2
PICALM-215	ENST00000531558	PI4K2B	G5E9Z4	385 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	ZNF197	O14709	1029 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	ALAD	P13716	330 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	PTPN1	P18031	435 aa	Known RBP	27.53	■■■□□ 2
PICALM-215	ENST00000531558	ERCC5	P28715	1186 aa	Predicted RBP	27.53	■■■□□ 2
PICALM-215	ENST00000531558	CCR2	P41597	374 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	FMO5	P49326	533 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	PTPN21	Q16825	1174 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	MDH1B	Q5I0G3	518 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	27.53	■■■□□ 2
PICALM-215	ENST00000531558	TMC8	Q8IU68	726 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	TRIM59	Q8IWR1	403 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	NPAS3	Q8IXF0	933 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	B3GALNT2	Q8NCR0	500 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	FAM200A	Q8TCP9	573 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	ING5	Q8WYH8	240 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	PCED1B	Q96HM7	432 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	LRRC3	Q9BY71	257 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	CYP3A43	Q9HB55	503 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	DOCK8	Q8NF50	2099 aa		27.53	■■■□□ 2
PICALM-215	ENST00000531558	ASGR2	P07307	311 aa		27.52	■■■□□ 2
PICALM-215	ENST00000531558	CCDC192	P0DO97	292 aa		27.52	■■■□□ 2
PICALM-215	ENST00000531558	MYL4	P12829	197 aa		27.52	■■■□□ 2
PICALM-215	ENST00000531558	CEBPB	P17676	345 aa		27.52	■■■□□ 2
PICALM-215	ENST00000531558	MAGEA11	P43364	429 aa		27.52	■■■□□ 2
PICALM-215	ENST00000531558	TCEAL4	Q96EI5	215 aa		27.52	■■■□□ 2
PICALM-215	ENST00000531558	FAXDC2	Q96IV6	333 aa		27.52	■■■□□ 2
PICALM-215	ENST00000531558	MAGEC2	Q9UBF1	373 aa	Predicted RBP	27.52	■■■□□ 2
PICALM-215	ENST00000531558	PMM2	O15305	246 aa		27.51	■■□□□ 1.99
PICALM-215	ENST00000531558	MICAL2	O94851	1124 aa		27.51	■■□□□ 1.99
PICALM-215	ENST00000531558	GPR15	P49685	360 aa		27.51	■■□□□ 1.99
PICALM-215	ENST00000531558	RPL10A	P62906	217 aa	Known RBP	27.51	■■□□□ 1.99
PICALM-215	ENST00000531558	CYP27A1	Q02318	531 aa		27.51	■■□□□ 1.99
PICALM-215	ENST00000531558	INCA1	Q0VD86	236 aa		27.51	■■□□□ 1.99
PICALM-215	ENST00000531558	WDR44	Q5JSH3	913 aa		27.51	■■□□□ 1.99
PICALM-215	ENST00000531558	CCDC183	Q5T5S1	534 aa		27.51	■■□□□ 1.99
PICALM-215	ENST00000531558	UNC93A	Q86WB7	457 aa		27.51	■■□□□ 1.99
PICALM-215	ENST00000531558	GIPC2	Q8TF65	315 aa		27.51	■■□□□ 1.99
PICALM-215	ENST00000531558	TNIP3	Q96KP6	325 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms