RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551	INTS6L	Q5JSJ4	861 aa	Known RBP	18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	MTRR	Q9UBK8	725 aa		18.78	■□□□□ 0.6
CTSB-222	ENST00000531551	OR6C75	A6NL08	312 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	PTMA	P06454	111 aa	Known RBP	18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	PAEP	P09466	180 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	CYP11B1	P15538	503 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	BRD2	P25440	801 aa	Known RBP	18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	OR1D2	P34982	312 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	IRS1	P35568	1242 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	BPIFB4	P59827	614 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	CYP27A1	Q02318	531 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	SMC1A	Q14683	1233 aa	Known RBP	18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	TDRD12	Q587J7	1177 aa	Known RBP	18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	TAF3	Q5VWG9	929 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	FMNL3	Q8IVF7	1028 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	CRYBG2	Q8N1P7	616 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	CRTAC1	Q9NQ79	661 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	AIPL1	Q9NZN9	384 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	ADAM12	O43184	909 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	KLHL30	Q0D2K2	578 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	SGO2	Q562F6	1265 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	IRF2BP2	Q7Z5L9	587 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	LRRTM3	Q86VH5	581 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	DCP1B	Q8IZD4	617 aa	Known RBP	18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	PGLYRP2	Q96PD5	576 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	DNAJC7	Q99615	494 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	MED10	Q9BTT4	135 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	PDCL3	Q9H2J4	239 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	BACE2	Q9Y5Z0	518 aa		18.77	■□□□□ 0.6
CTSB-222	ENST00000531551	HIDE1	A8MVS5	230 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	VDR	P11473	427 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	CCDC130	P13994	396 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	ADORA2B	P29275	332 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	CAMK1	Q14012	370 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	TFAP2B	Q92481	460 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	SYN2	Q92777	582 aa	Predicted RBP	18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	CYFIP2	Q96F07	1278 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	CLSTN3	Q9BQT9	956 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	OXCT2	Q9BYC2	517 aa	Predicted RBP	18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	ZCWPW1	Q9H0M4	648 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	HAUS4	Q9H6D7	363 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	NGRN	Q9NPE2	291 aa	Known RBP	18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	TMLHE	Q9NVH6	421 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	NLRC5	Q86WI3	1866 aa		18.76	■□□□□ 0.59
CTSB-222	ENST00000531551	SOX1	O00570	391 aa	Predicted RBP	18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	TBC1D4	O60343	1298 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	GSDMD	P57764	484 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	CCDC173	Q0VFZ6	552 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	NOP9	Q86U38	636 aa	Known RBP	18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	MRPL43	Q8N983	215 aa	Known RBP	18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	MYCBPAP	Q8TBZ2	947 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	SLC2A14	Q8TDB8	520 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	ZNF606	Q8WXB4	792 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	MYLPF	Q96A32	169 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	PCED1B	Q96HM7	432 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	PDLIM2	Q96JY6	352 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	EMILIN2	Q9BXX0	1053 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	SEPT11	Q9NVA2	429 aa	Known RBP	18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	KIAA1257	Q9ULG3	409 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	CLDN5	O00501	218 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	TEX28	O15482	410 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	LILRB3	O75022	631 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	CNP	P09543	421 aa	Known RBP	18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	ROR1	Q01973	937 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	CREM	Q03060	361 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	SLC8B1	Q6J4K2	584 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	PALB2	Q86YC2	1186 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	SPATA2L	Q8IUW3	424 aa	Predicted RBP	18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	EPS8L1	Q8TE68	723 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	SLC20A1	Q8WUM9	679 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	LRCH3	Q96II8	777 aa		18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	ABI2	Q9NYB9	513 aa	Predicted RBP	18.75	■□□□□ 0.59
CTSB-222	ENST00000531551	PLXNA4	Q9HCM2	1894 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	FAM170A	A1A519	330 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	C2orf71	A6NGG8	1288 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	MED7	O43513	233 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	SERPING1	P05155	500 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	KLRC2	P26717	231 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	MAPRE1	Q15691	268 aa	Known RBP	18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	FAM171B	Q6P995	826 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	WDR59	Q6PJI9	974 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	ZSWIM1	Q9BR11	485 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	TSPAN16	Q9UKR8	245 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	VWA8	A3KMH1	1905 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	TSC2	P49815	1807 aa		18.74	■□□□□ 0.59
CTSB-222	ENST00000531551	WDR27	A2RRH5	827 aa		18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	FSCN2	O14926	492 aa		18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	MME	P08473	750 aa		18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	PLEK	P08567	350 aa	Predicted RBP	18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	NDUFV1	P49821	464 aa		18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	GPR17	Q13304	367 aa		18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	GOLGA7B	Q2TAP0	167 aa		18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	RNF19B	Q6ZMZ0	732 aa		18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	PASD1	Q8IV76	773 aa		18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	GPR65	Q8IYL9	337 aa		18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	FAM161B	Q96MY7	647 aa		18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	KLHL5	Q96PQ7	755 aa		18.73	■□□□□ 0.59
CTSB-222	ENST00000531551	PANX2	Q96RD6	677 aa		18.73	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms