RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 MAN1C1Q9NR34 630 aa5.93□□□□□ -1.46
PTPRK-220ENST00000531466 RLIMQ9NVW2 624 aa5.93□□□□□ -1.46
PTPRK-220ENST00000531466 LRP12Q9Y561 859 aa5.93□□□□□ -1.46
PTPRK-220ENST00000531466 CYP2D7A0A087X1C5 515 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 NT5C1B-RDH14C9J2C7 533 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 CYP2C19P33261 490 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 KIF23Q02241 960 aaPredicted RBP5.92□□□□□ -1.46
PTPRK-220ENST00000531466 TREML2Q5T2D2 321 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 MIS18BP1Q6P0N0 1132 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 WDR53Q7Z5U6 358 aaPredicted RBP5.92□□□□□ -1.46
PTPRK-220ENST00000531466 ZDHHC17Q8IUH5 632 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 C8orf58Q8NAV2 365 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 ATL2Q8NHH9 583 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 ADAMTS15Q8TE58 950 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 NSUN6Q8TEA1 469 aaKnown RBP5.92□□□□□ -1.46
PTPRK-220ENST00000531466 ASB2Q96Q27 587 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 GPR35Q9HC97 309 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 TRNAU1APQ9NX07 287 aaKnown RBP5.92□□□□□ -1.46
PTPRK-220ENST00000531466 MKS1Q9NXB0 559 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 SIDT1Q9NXL6 827 aaKnown RBP5.92□□□□□ -1.46
PTPRK-220ENST00000531466 AFG3L2Q9Y4W6 797 aa5.92□□□□□ -1.46
PTPRK-220ENST00000531466 MT-CO1P00395 513 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 IL6RP08887 468 aaPredicted RBP5.91□□□□□ -1.46
PTPRK-220ENST00000531466 SMARCA1P28370 1054 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 ZNF134P52741 427 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 LINC00205P59089 165 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 TMEM108Q6UXF1 575 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 DTX2Q86UW9 622 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 NANOGP1Q8N7R0 232 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 PRSS3P2Q8NHM4 247 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 CYP2W1Q8TAV3 490 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 TMEM79Q9BSE2 394 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 C1orf43Q9BWL3 253 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 TINAGL1Q9GZM7 467 aaPredicted RBP5.91□□□□□ -1.46
PTPRK-220ENST00000531466 DUSP22Q9NRW4 184 aa5.91□□□□□ -1.46
PTPRK-220ENST00000531466 GNL3LQ9NVN8 582 aaKnown RBP5.91□□□□□ -1.46
PTPRK-220ENST00000531466 CCDC187A0A096LP49 1063 aa5.9□□□□□ -1.46
PTPRK-220ENST00000531466 LRRC14BA6NHZ5 514 aa5.9□□□□□ -1.46
PTPRK-220ENST00000531466 SLC16A3O15427 465 aaKnown RBP5.9□□□□□ -1.46
PTPRK-220ENST00000531466 BCAR3O75815 825 aa5.9□□□□□ -1.46
PTPRK-220ENST00000531466 ONECUT2O95948 504 aa5.9□□□□□ -1.46
PTPRK-220ENST00000531466 RARBP10826 455 aa5.9□□□□□ -1.46
PTPRK-220ENST00000531466 HOXA4Q00056 320 aaPredicted RBP5.9□□□□□ -1.46
PTPRK-220ENST00000531466 SP2Q02086 613 aa5.9□□□□□ -1.46
PTPRK-220ENST00000531466 BOP1Q14137 746 aaKnown RBP5.9□□□□□ -1.46
PTPRK-220ENST00000531466 TRIP6Q15654 476 aaKnown RBP5.9□□□□□ -1.46
PTPRK-220ENST00000531466 LRRC71Q8N4P6 559 aa5.9□□□□□ -1.46
PTPRK-220ENST00000531466 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.9□□□□□ -1.46
PTPRK-220ENST00000531466 CNTD1Q8N815 330 aa5.9□□□□□ -1.46
PTPRK-220ENST00000531466 NRACQ8N912 160 aa5.9□□□□□ -1.46
PTPRK-220ENST00000531466 C1orf162Q8NEQ5 155 aaPredicted RBP5.9□□□□□ -1.46
PTPRK-220ENST00000531466 COA7Q96BR5 231 aa5.9□□□□□ -1.46
PTPRK-220ENST00000531466 FAM126AQ9BYI3 521 aaPredicted RBP5.9□□□□□ -1.46
PTPRK-220ENST00000531466 KLHL13Q9P2N7 655 aa5.9□□□□□ -1.46
PTPRK-220ENST00000531466 MYMKA6NI61 221 aa5.89□□□□□ -1.47
PTPRK-220ENST00000531466 XPOTO43592 962 aaKnown RBP5.89□□□□□ -1.47
PTPRK-220ENST00000531466 TLR5O60602 858 aa5.89□□□□□ -1.47
PTPRK-220ENST00000531466 RPLP2P05387 115 aaKnown RBP5.89□□□□□ -1.47
PTPRK-220ENST00000531466 PDE1AP54750 535 aa5.89□□□□□ -1.47
PTPRK-220ENST00000531466 TRIM72Q6ZMU5 477 aa5.89□□□□□ -1.47
PTPRK-220ENST00000531466 PPP1R32Q7Z5V6 425 aa5.89□□□□□ -1.47
PTPRK-220ENST00000531466 CBARPQ8N350 705 aaPredicted RBP5.89□□□□□ -1.47
PTPRK-220ENST00000531466 SPATA3Q8NHX4 192 aa5.89□□□□□ -1.47
PTPRK-220ENST00000531466 RITA1Q96K30 269 aa5.89□□□□□ -1.47
PTPRK-220ENST00000531466 SERPINB13Q9UIV8 391 aa5.89□□□□□ -1.47
PTPRK-220ENST00000531466 SERTAD3Q9UJW9 196 aa5.89□□□□□ -1.47
PTPRK-220ENST00000531466 ADAMTS5Q9UNA0 930 aa5.89□□□□□ -1.47
PTPRK-220ENST00000531466 CFAP20Q9Y6A4 193 aaKnown RBP5.89□□□□□ -1.47
PTPRK-220ENST00000531466 WDR17Q8IZU2 1322 aa5.89□□□□□ -1.47
PTPRK-220ENST00000531466 E5RJQ4 531 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 SOCS2O14508 198 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 PCDHGA12O60330 932 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 FESP07332 822 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 PIK3CGP48736 1102 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 TCF15Q12870 199 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 KIF22Q14807 665 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 INAVAQ3KP66 663 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 TTC7BQ86TV6 843 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 NOP9Q86U38 636 aaKnown RBP5.88□□□□□ -1.47
PTPRK-220ENST00000531466 FSD1LQ9BXM9 530 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 SIK2Q9H0K1 926 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 PCDHGA9Q9Y5G4 932 aaKnown RBP5.88□□□□□ -1.47
PTPRK-220ENST00000531466 PCDHGA8Q9Y5G5 932 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 PCDHGA7Q9Y5G6 932 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 PCDHGA6Q9Y5G7 932 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 PCDHGA3Q9Y5H0 932 aa5.88□□□□□ -1.47
PTPRK-220ENST00000531466 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
PTPRK-220ENST00000531466 KLHL33A6NCF5 533 aa5.87□□□□□ -1.47
PTPRK-220ENST00000531466 M0QYG6 137 aa5.87□□□□□ -1.47
PTPRK-220ENST00000531466 CCKARP32238 428 aa5.87□□□□□ -1.47
PTPRK-220ENST00000531466 DSC2Q02487 901 aa5.87□□□□□ -1.47
PTPRK-220ENST00000531466 UAP1L1Q3KQV9 507 aa5.87□□□□□ -1.47
PTPRK-220ENST00000531466 ICE2Q659A1 982 aa5.87□□□□□ -1.47
PTPRK-220ENST00000531466 FCRL6Q6DN72 434 aa5.87□□□□□ -1.47
PTPRK-220ENST00000531466 IRF2BP2Q7Z5L9 587 aa5.87□□□□□ -1.47
PTPRK-220ENST00000531466 USP37Q86T82 979 aa5.87□□□□□ -1.47
PTPRK-220ENST00000531466 NELL2Q99435 816 aa5.87□□□□□ -1.47
PTPRK-220ENST00000531466 PHLDB1Q86UU1 1377 aa5.86□□□□□ -1.47
PTPRK-220ENST00000531466 NPSP0C0P6 89 aa5.86□□□□□ -1.47
PTPRK-220ENST00000531466 PRDX5P30044 214 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms